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tyang816 / ProtSSN

Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2024).
MIT License
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torch_geometric version #3

Open yxliu-TAMU opened 5 months ago

yxliu-TAMU commented 5 months ago

Hi,

Thanks for your code, and model.

Just a freindly notice, it seems that torch_geometric update some functions. The function "propagate" in the egnn_pytorch_geometric.py file doesn't work properly, and have an error message: "too many values to unpack (expected 2)".

I got this error when I used version 2.5.2, but your code worked well after downgrade to 2.3.0.

Best, Yuxuan

tyang816 commented 5 months ago

Hi, Yuxuan

Thank you for your kind reminder. I have added labels to your issue to help other possible users. In the future, I may refactor the code for project optimization. 😊

Best, Yang Tan