Closed brendanwee closed 3 years ago
The estimate
step has a --plot
argument that plots binned read counts along the genome and model fit. The argument takes a folder, and outputs one plot for each predicted PTR. Is this similar to your thinking?
The --plot
argument was missing from the estimate
specification in the documentation. I updated it just now.
Yes that is exactly what I was thinking. Thank you!
On Fri, Aug 27, 2021 at 4:11 PM Tyler @.***> wrote:
The estimate step has a --plot argument that plots binned read counts along the genome and model fit for each predicted PTR. Is this similar to your thinking?
The --plot argument was missing from the estimate specification in the documentation. I updated it just now.
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Brendan Michael Wee
Cell: 925-788-8196 <925-788-8196>
I'm going to close this issue. Feel free to reopen if you have any other questions.
It would be nice to visualize the coverage maps of the species that had PTR predicted.
I was able to create a simple one by just taking all the read locations and creating a histogram, but I'm guessing that is probably a bit naive.