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tzcoolman / FACS-OLD

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-o flag is invalid #6

Closed brainstorm closed 12 years ago

brainstorm commented 12 years ago

$ ./bloom_build -k 21 -l tests/reference_genomes.list -o tests/data/ecoli.bloom K_mer size: The argument of -k is 21 File list : The argument of -l is tests/reference_genomes.list ./bloom_build: invalid option -- 'o' Unknown option: -o

brainstorm commented 12 years ago

My fault, I recompliled, but -l seems to be the problem now:

./bloom_build -k 21 -l tests/reference_genomes.list -o tests/data/ecoli.bloom ./bloom_build: invalid option -- 'l' Unknown option: -l

What is the new usage for bloom_build? Could you write it on README.md?

tzcoolman commented 12 years ago

roman, there is no '-l' any more. Plz use '-r' instead. And use it like this:

./bloom_build -k 21 -r test/k_12.fasta -o tests/data/ecoli.bloom

brainstorm commented 12 years ago

Thanks Enze!