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ualbertalib / can-link

Front end react app for CanLink project
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Link to full record not working #6

Closed sfarnel closed 3 years ago

sfarnel commented 3 years ago

On search results page, if you click on See Abstract, the 'Link to Full Record' button (bottom right) doesn't work:

image

When you click on this you should be taken to the item display page

jchartrand commented 3 years ago

I should have mentioned that - I put that link in there just to show where one could go, but there is as yet no item display page.

The modal could be expanded to show more about the record, but you likely also do want a separate (and importantly, linkable) page for the item.

sfarnel commented 3 years ago

Thanks James. Yes, this is a critical component for which we have designs so this would seem to me a top priority for next step.

On Fri, Aug 14, 2020 at 1:04 PM James Chartrand notifications@github.com wrote:

I should have mentioned that - I put that link in there just to show where one could go, but there is as yet no item display page.

The modal could be expanded to show more about the record, but you likely also do want a separate (and importantly, linkable) page for the item.

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-- Sharon Farnel she/her Head, Metadata Strategies University of Alberta Library sharon.farnel@ualberta.ca | 780-492-3685

The University of Alberta is situated on traditional Treaty 6 territory and homeland of the Métis peoples. Amiskwaciwâskahikan / ᐊᒥᐢᑲᐧᒋᕀᐋᐧᐢᑲᐦᐃᑲᐣ / Edmonton

jchartrand commented 3 years ago

To get an early jump on it, a rough sketch of what the page should look like, including information it should display, would be super helpful. Such a sketch could just be done on paper, then photographed with a phone, and the image pasted in this Github issue.

On Fri, Aug 14, 2020 at 4:02 PM Sharon Farnel notifications@github.com wrote:

Thanks James. Yes, this is a critical component for which we have designs so this would seem to me a top priority for next step.

On Fri, Aug 14, 2020 at 1:04 PM James Chartrand notifications@github.com wrote:

I should have mentioned that - I put that link in there just to show where one could go, but there is as yet no item display page.

The modal could be expanded to show more about the record, but you likely also do want a separate (and importantly, linkable) page for the item.

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.

-- Sharon Farnel she/her Head, Metadata Strategies University of Alberta Library sharon.farnel@ualberta.ca | 780-492-3685

The University of Alberta is situated on traditional Treaty 6 territory and homeland of the Métis peoples. Amiskwaciwâskahikan / ᐊᒥᐢᑲᐧᒋᕀᐋᐧᐢᑲᐦᐃᑲᐣ / Edmonton

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jchartrand commented 3 years ago

Ah, sorry, I wrote in haste. I see that you said you do already have designs. If you could paste them in here, or links to them here, that would be great.

jchartrand commented 3 years ago

Aha, sorry again, I think you'd already pointed me at the page. Is this the design (pasted below)?

A couple questions there:

  1. I don't think there are page images available (or an index)?
  2. What should go in the 'metadata' columns?
image
sfarnel commented 3 years ago

Thanks James.

Copied in Carlos as he has some thoughts on how we would work that page given that we aren't hosting pdfs but rather linking to them in their original repositories.

On Fri, Aug 14, 2020 at 2:16 PM James Chartrand notifications@github.com wrote:

Aha, sorry again, I think you'd already pointed me at the page. Is this the design (pasted below)?

A couple questions there:

  1. I don't think there are page images available (or an index)?
  2. What should go in the 'metadata' columns?

[image: image] https://user-images.githubusercontent.com/547165/90289061-14bb0080-de49-11ea-8715-f5ab45dd41dd.png

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-- Sharon Farnel she/her Head, Metadata Strategies University of Alberta Library sharon.farnel@ualberta.ca | 780-492-3685

The University of Alberta is situated on traditional Treaty 6 territory and homeland of the Métis peoples. Amiskwaciwâskahikan / ᐊᒥᐢᑲᐧᒋᕀᐋᐧᐢᑲᐦᐃᑲᐣ / Edmonton

sfarnel commented 3 years ago

Hi James,

Yes we discussed this before, this page should be flexible to include whatever TEXT is available from metadata: index, abstract, summary, references, etc. I estimate this could be organized in 4-5 columns (including the box for index on the left). If we only have access to the index and abstract, I suggest to make the abstract 3-column wide with bigger text size (still smaller than the title though). For the thumbnails at the bottom, if we don’t have access to the covers of the documents I suggest to replace them by a PDF or DOC icon and the title of the file. Let me know if this makes sense to you.

Carlos

On Aug 14, 2020, at 2:35 PM, Sharon Farnel sharon.farnel@ualberta.ca wrote:

Thanks James.

Copied in Carlos as he has some thoughts on how we would work that page given that we aren't hosting pdfs but rather linking to them in their original repositories.

On Fri, Aug 14, 2020 at 2:16 PM James Chartrand <notifications@github.com mailto:notifications@github.com> wrote:

Aha, sorry again, I think you'd already pointed me at the page. Is this the design (pasted below)?

A couple questions there:

I don't think there are page images available (or an index)? What should go in the 'metadata' columns? https://user-images.githubusercontent.com/547165/90289061-14bb0080-de49-11ea-8715-f5ab45dd41dd.png — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/jchartrand/can-link/issues/6#issuecomment-674254561, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABD26TDQZMFVRAP6X756RZTSAWLRPANCNFSM4P7YXHXQ.

-- Sharon Farnel she/her Head, Metadata Strategies University of Alberta Library sharon.farnel@ualberta.ca mailto:sharon.farnel@ualberta.ca | 780-492-3685

The University of Alberta is situated on traditional Treaty 6 territory and homeland of the Métis peoples. Amiskwaciwâskahikan / ᐊᒥᐢᑲᐧᒋᕀᐋᐧᐢᑲᐦᐃᑲᐣ / Edmonton

sfarnel commented 3 years ago

@jchartrand do you have a time estimate? (sorry if I'm just not seeing it!)

jchartrand commented 3 years ago

James Guesstimate: 1 day.

I suggest that I create a page with whatever data is available and then everyone else can go tweak from there.

I will guesstimate a day to do this initial page - I will have to add not just the page, but something called react router/navigation, that allows moving back and forth between pages and more importantly - allows deep linking (allowing the user to open the page to a specific record).

jchartrand commented 3 years ago

Sorry, I'd written the comment, but then seemingly hadn't clicked the 'Comment' button. It is in there now.

sfarnel commented 3 years ago

Thanks James!

On Fri, Aug 21, 2020 at 2:18 PM James Chartrand notifications@github.com wrote:

Sorry, I'd written the comment, but then seemingly hadn't clicked the 'Comment' button. It is in there now.

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-- Sharon Farnel she/her Head, Metadata Strategies University of Alberta Library sharon.farnel@ualberta.ca | 780-492-3685

The University of Alberta is situated on traditional Treaty 6 territory and homeland of the Métis peoples. Amiskwaciwâskahikan / ᐊᒥᐢᑲᐧᒋᕀᐋᐧᐢᑲᐦᐃᑲᐣ / Edmonton

sfarnel commented 3 years ago

In our meeting we agreed to:

@danydvd you and I work to get the data indexed in Solr

jchartrand commented 3 years ago

@danydvd @sfarnel

We want a citable link for each record, something like so:

http://canlink.ca/thesis/345

Which will forever more always open that thesis (identified by 345) in our new app

My question is: what id I should use?

The solr record uses a linked data url:

{ "id":"http://canlink.library.ualberta.ca/thesis/2ee2c45c64664d7f81816d939e57a536", "year":[2018], "title":["Computer Vision-Based Motion Control and State Estimation for Unmanned Aerial Vehicles (UAVs)"], "institution":["http://canlink.library.ualberta.ca/institution/University_of_Alberta"],

Can I reliably use the bit at the end of the linked data url:

2ee2c45c64664d7f81816d939e57a536

?

Are we pretty sure that url will never change, or at least will be durable 'enough' for the expected/guaranteed life of the app?

sfarnel commented 3 years ago

Thanks @jchartrand I think this should be a fine and durable solution. @danydvd do you agree?

danydvd commented 3 years ago

Thanks @jchartrand. That sounds good to me too.

jchartrand commented 3 years ago

@sfarnel @CarlsoFiorention @danydvd

The design above (elaborated in some of the comments) assumes we have page text, index?, summary, references, page images, supervisor data, faculty/dept info, etc, none of which I think we have for now.

It is also suggested that if there are no pages/covers that we use a place-filling PDF or DOC icon where the pages would normally appear. Since we don’t have any pages at all, and I don’t think any will be available in the near future (?), should we perhaps hold off on even any suggestion of images (i.e, placeholder images)? It is generally considered a bad idea in software to build something now that you think you'll need in the future. It complicates the code and can often make it harder to enable the new feature later, in part because we can't predict the future (how the code will end up working) and in part because it will be likely be harder for someone else later to understand what was done.

I think the only other change I could take from the design/comments is to spread the abstract across three columns, which I can do if that still makes sense given that so much else about the design will have to change. To save time, I'll hold off on the three columns until I hear from you all about the rest. It is easier/faster to make a bunch of changes all at once.

sfarnel commented 3 years ago

Thanks @jchartrand Makes sense. Danoosh is working on getting the additional data into Solr. For some we will have additional information such as supervisor, department, etc. so there will be some of that. @CarlsoFiorention please advise once we have this how we can revise the page

CarlsoFiorention commented 3 years ago

If you think that, from a programming point of view, it will be easier not anticipating any features that may be needed in the future, and that creating those solutions only when we need them is more practical, I’m OK with that. From a design perspective though, these things needs to be considered from the beginning and keep them in mind.

Regarding the three column structure. I suggest to keep spreading the abstract (and any text in fact) two-column wide maximum not three. More than 2 1/2 alphabets long (65 characters) is uncomfortable to read. Could the third column be used for any additional data we could collect? like other thesis related? or a glance of the references? That would be very useful for the user…

On Aug 28, 2020, at 6:50 AM, James Chartrand notifications@github.com wrote:

@sfarnel https://github.com/sfarnel @CarlsoFiorention https://github.com/CarlsoFiorention @danydvd https://github.com/danydvd The design above (elaborated in some of the comments) assumes we have page text, index?, summary, references, page images, supervisor data, faculty/dept info, etc, none of which I think we have for now.

It is also suggested that if there are no pages/covers that we use a place-filling PDF or DOC icon where the pages would normally appear. Since we don’t have any pages at all, and I don’t think any will be available in the near future (?), should we perhaps hold off on even any suggestion of images (i.e, placeholder images)? It is generally considered a bad idea in software to build something now that you think you'll need in the future. It complicates the code and can often make it harder to enable the new feature later, in part because we can't predict the future (how the code will end up working) and in part because it will be likely be harder for someone else later to understand what was done.

I think the only other change I could take from the design/comments is to spread the abstract across three columns, which I can do if that still makes sense given that so much else about the design will have to change. To save time, I'll hold off on the three columns until I hear from you all about the rest. It is easier/faster to make a bunch of changes all at once.

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sfarnel commented 3 years ago

Thanks @CarlsoFiorention James, can you work with the additional specs Carlos has provided (in terms of the two columns for the abstract and what metadata we have)? In terms of the what could go in the third column, we could not do references as we are not harvesting the pdfs. We could think about related theses based on subject, for example, but would need further detail on how that would function and what it would look like. That might be for future?

jchartrand commented 3 years ago

Yup, sounds good. @CarlsoFiorention could you very briefly describe what specific data -- that we have now in each SOLR record (see below for example) -- should go in the third column, or should appear above the columns? Nothing complicated, just like on a piece of paper, with a picture like:

image

Here is a sample SOLR record that will tell you which fields we have available (@danydvd do we have a more recent sample record with any new fields?) and also a sense of what is in each field:

{ "id":"http://canlink.library.ualberta.ca/thesis/2ee2c45c64664d7f81816d939e57a536", "year":[2018], "title":["Computer Vision-Based Motion Control and State Estimation for Unmanned Aerial Vehicles (UAVs)"], "institution":["http://canlink.library.ualberta.ca/institution/University_of_Alberta"], "creator_url":["http://canlink.library.ualberta.ca/person/84fac497ac367796b113cd16c7be42f0"], "creator":["Fink Geoffrey"], "lang":["http://id.loc.gov/vocabulary/iso639-2/eng"], "creator_first":["Geoffrey"], "creator_last":["Fink"], "degree":["PhD"], "subject":["computer vision", "visual servoing", "quadrotor", "unmanned aerial vehicles", "drones", "control", "visual state estimation", "slam", "simultaneous localization and mapping"], "abstract":["To achieve a fully autonomous unmanned aerial vehicle (UAV) the vehicle needs a high level of self awareness. At a minimum it needs to know where it is and where it wants to go. Computer vision (CV) is a logical solution to this problem. However, using CV to ...."]

CarlsoFiorention commented 3 years ago

Given the limited options we have for now options, for the third column I suggest to include the list of keywords: ["computer vision", "visual servoing", "quadrotor", "unmanned aerial vehicles", "drones", "control", "visual state estimation", "slam", "simultaneous localization and mapping"],

jchartrand commented 3 years ago

So an added complication is that I have spent the past half hour trying to find an easy way to split text across columns using the material-ui components (I would have thought it would be straightforward but seemingly not). I might have now found some css to do it, but this might continue to be more complicated/finicky than I'd like.

@sfarnel how much time should I spend on this before moving on, or should I just move on now and come back to the columns later?

sfarnel commented 3 years ago

Thanks all. @jchartrand @CarlsoFiorention given our current limited options in terms of what we have available (Danoosh is working on getting more data in Solr) I think we should make available what we have as a single column, and when we see how much additional we get with the new fields, then we can revisit the multiple columns.

jchartrand commented 3 years ago

@sfarnel @danydvd @CarlsoFiorention

Are there any more changes to make to this now?

This is what it looks like as it stands:

http://206.167.181.124/record/81bd7da7a9d4efcdd1df5ebe2b4f93a2

Maybe add the linked data uri?

Anything else?

sfarnel commented 3 years ago

@jchartrand I don't see language so if that could be added. once we have more info from @danydvd we can add more so if you can add language and then set this aside for the moment then that should be great.

jchartrand commented 3 years ago

@sfarnel Will do. I'll have to create a mapping from the uri for each language to the human readable label (and a lookup). I'll hard code this into the app for now (like I did with the universities) unless you'd like the mapping kept somewhere else. Not sure how many languages are in there (I'll check) but I don't think too many.

CarlsoFiorention commented 3 years ago

From what I see in my browser (Safari, Mac, see attachment) it needs a few adjustments:

Thanks

On Aug 28, 2020, at 1:09 PM, James Chartrand notifications@github.com wrote:

@sfarnel https://github.com/sfarnel @danydvd https://github.com/danydvd @CarlsoFiorention https://github.com/CarlsoFiorention Are there any more changes to make to this now?

This is what it looks like as it stands:

http://206.167.181.124/record/81bd7da7a9d4efcdd1df5ebe2b4f93a2 http://206.167.181.124/record/81bd7da7a9d4efcdd1df5ebe2b4f93a2 Maybe add the linked data uri?

Anything else?

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sfarnel commented 3 years ago

@jchartrand let's hold off on language then as we'll need to have human readable labels for languages but other things as well. I'd like to chat with @danydvd to see if we prefer to do this on the data side of things

jchartrand commented 3 years ago

If it helps, here are the language uris in there now, and their counts ( you’ll notice there are in some cases different URIs for the same language):

"languages":{ "buckets":[{ "val":"http://id.loc.gov/vocabulary/iso639-2/eng", "count":21314}, { "val":"http://id.loc.gov/vocabulary/languages/eng", "count":9496}, { "val":"http://id.loc.gov/vocabulary/languages/fre", "count":185}, { "val":"http://id.loc.gov/vocabulary/iso639-2/fre", "count":79}, { "val":"http://id.loc.gov/vocabulary/iso639-2/spa", "count":22}, { "val":"http://id.loc.gov/vocabulary/iso639-2/ger", "count":16}, { "val":"http://id.loc.gov/vocabulary/iso639-2/ita", "count":14}, { "val":"http://id.loc.gov/vocabulary/iso639-2/ukr", "count":6}, { "val":"http://id.loc.gov/vocabulary/iso639-2/rus", "count":4}, { "val":"http://id.loc.gov/vocabulary/languages/spa", "count":3}, { "val":"http://id.loc.gov/vocabulary/languages/ger", "count":2}, { "val":"http://id.loc.gov/vocabulary/languages/", "count":1}, { "val":"http://id.loc.gov/vocabulary/languages/ebg", "count":1}]},

Since it is probably a related question, here is what is in there for degrees (it’s got the same problem with different names for the potentially the same thing, e.g, msc and master (or ma, mba, etc.)

"degrees":{ "buckets":[{ "val":"msc", "count":10480}, { "val":"phd", "count":10303}, { "val":"med", "count":3257}, { "val":"ma", "count":3096}, { "val":"master", "count":2715}, { "val":"meng", "count":494}, { "val":"mn", "count":418}, { "val":"llm", "count":110}, { "val":"masc", "count":40}, { "val":"msw", "count":34}, { "val":"mba", "count":27}, { "val":"mws", "count":21}, { "val":"menv", "count":7}, { "val":"mphysed", "count":7}, { "val":"march", "count":6}, { "val":"mfa", "count":5}, { "val":"lld", "count":2}, { "val":"mcoun", "count":2}, { "val":"mmath", "count":2}, { "val":"dba", "count":1}, { "val":"des", "count":1}, { "val":"dsc", "count":1}, { "val":"maed", "count":1}, { "val":"mdent", "count":1}, { "val":"mdes", "count":1}, { "val":"mhstud", "count":1}]},

On Aug 28, 2020, at 3:36 PM, Sharon Farnel notifications@github.com wrote:

@jchartrand https://github.com/jchartrand let's hold off on language then as we'll need to have human readable labels for languages but other things as well. I'd like to chat with @danydvd https://github.com/danydvd to see if we prefer to do this on the data side of things

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sfarnel commented 3 years ago

Thanks James.

Indeed, the multiple value for language was an intentional data modeling decision (long story) and the degrees are just plain ol' messy because there are an infinite variety of them :) We do have a 'key' for these so Danoosh and I will chat about the best way to handle these so that they can be handled dynamically. Will get back to you.

On Fri, Aug 28, 2020 at 1:45 PM James Chartrand notifications@github.com wrote:

If it helps, here are the language uris in there now, and their counts ( you’ll notice there are in some cases different URIs for the same language):

"languages":{ "buckets":[{ "val":"http://id.loc.gov/vocabulary/iso639-2/eng", "count":21314}, { "val":"http://id.loc.gov/vocabulary/languages/eng", "count":9496}, { "val":"http://id.loc.gov/vocabulary/languages/fre", "count":185}, { "val":"http://id.loc.gov/vocabulary/iso639-2/fre", "count":79}, { "val":"http://id.loc.gov/vocabulary/iso639-2/spa", "count":22}, { "val":"http://id.loc.gov/vocabulary/iso639-2/ger", "count":16}, { "val":"http://id.loc.gov/vocabulary/iso639-2/ita", "count":14}, { "val":"http://id.loc.gov/vocabulary/iso639-2/ukr", "count":6}, { "val":"http://id.loc.gov/vocabulary/iso639-2/rus", "count":4}, { "val":"http://id.loc.gov/vocabulary/languages/spa", "count":3}, { "val":"http://id.loc.gov/vocabulary/languages/ger", "count":2}, { "val":"http://id.loc.gov/vocabulary/languages/", "count":1}, { "val":"http://id.loc.gov/vocabulary/languages/ebg", "count":1}]},

Since it is probably a related question, here is what is in there for degrees (it’s got the same problem with different names for the potentially the same thing, e.g, msc and master (or ma, mba, etc.)

"degrees":{ "buckets":[{ "val":"msc", "count":10480}, { "val":"phd", "count":10303}, { "val":"med", "count":3257}, { "val":"ma", "count":3096}, { "val":"master", "count":2715}, { "val":"meng", "count":494}, { "val":"mn", "count":418}, { "val":"llm", "count":110}, { "val":"masc", "count":40}, { "val":"msw", "count":34}, { "val":"mba", "count":27}, { "val":"mws", "count":21}, { "val":"menv", "count":7}, { "val":"mphysed", "count":7}, { "val":"march", "count":6}, { "val":"mfa", "count":5}, { "val":"lld", "count":2}, { "val":"mcoun", "count":2}, { "val":"mmath", "count":2}, { "val":"dba", "count":1}, { "val":"des", "count":1}, { "val":"dsc", "count":1}, { "val":"maed", "count":1}, { "val":"mdent", "count":1}, { "val":"mdes", "count":1}, { "val":"mhstud", "count":1}]},

On Aug 28, 2020, at 3:36 PM, Sharon Farnel notifications@github.com wrote:

@jchartrand https://github.com/jchartrand let's hold off on language then as we'll need to have human readable labels for languages but other things as well. I'd like to chat with @danydvd https://github.com/danydvd to see if we prefer to do this on the data side of things

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-- Sharon Farnel she/her Head, Metadata Strategies University of Alberta Library sharon.farnel@ualberta.ca | 780-492-3685

The University of Alberta is situated on traditional Treaty 6 territory and homeland of the Métis peoples. Amiskwaciwâskahikan / ᐊᒥᐢᑲᐧᒋᕀᐋᐧᐢᑲᐦᐃᑲᐣ / Edmonton

jchartrand commented 3 years ago

From what I see in my browser (Safari, Mac, see attachment) it needs a few adjustments: - Keep left alignment consistent (no indents in Subjects and Abstracts) - Make Abstracts title same font size as Subjects title - The body text is too long, please reduce the width of the paragraph 25% shorter Thanks … On Aug 28, 2020, at 1:09 PM, James Chartrand @.***> wrote: @sfarnel https://github.com/sfarnel @danydvd https://github.com/danydvd @CarlsoFiorention https://github.com/CarlsoFiorention Are there any more changes to make to this now? This is what it looks like as it stands: http://206.167.181.124/record/81bd7da7a9d4efcdd1df5ebe2b4f93a2 http://206.167.181.124/record/81bd7da7a9d4efcdd1df5ebe2b4f93a2 Maybe add the linked data uri? Anything else? — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#6 (comment)>, or unsubscribe https://github.com/notifications/unsubscribe-auth/AGFMUPIZUXL7NJG5ML4OJRTSC76H5ANCNFSM4P7YXHXQ.

@CarlsoFiorention I don't think the attachment got uploaded, however, I think I know what you want.

jchartrand commented 3 years ago

@CarlsoFiorention I made the changes you requested, although I'm not sure that I understood the:

"The body text is too long, please reduce the width of the paragraph 25% shorter "

I increased the margins on either side of the abstract by 12.5% each. Maybe you don't want it centred? But then it also kind of depends on big the user opens their browser? Did you want it set to a specific max pixel (or character, i.e,. em) width? If so, what width? And should it remain left justified?

CarlsoFiorention commented 3 years ago

Please remain it left justified. Whats the current with of the paragraph?

On Aug 28, 2020, at 2:15 PM, James Chartrand notifications@github.com wrote:

@CarlsoFiorention https://github.com/CarlsoFiorention I made the changes you requested, although I'm not sure that I understood the:

"The body text is too long, please reduce the width of the paragraph 25% shorter "

I increased the margins on either side of the abstract by 12.5% each. Maybe you don't want it centred? But then it also kind of depends on big the user opens their browser? Did you want it set to a specific max pixel (or character, i.e,. em) width? If so, what width? And should it remain left justified?

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jchartrand commented 3 years ago

The paragraph doesn’t have a specific width - it stretches to fit the page, with margins of 12.5% on either side.

On Aug 28, 2020, at 4:23 PM, Carlos Fiorentino notifications@github.com wrote:

Please remain it left justified. Whats the current with of the paragraph?

On Aug 28, 2020, at 2:15 PM, James Chartrand notifications@github.com wrote:

@CarlsoFiorention https://github.com/CarlsoFiorention I made the changes you requested, although I'm not sure that I understood the:

"The body text is too long, please reduce the width of the paragraph 25% shorter "

I increased the margins on either side of the abstract by 12.5% each. Maybe you don't want it centred? But then it also kind of depends on big the user opens their browser? Did you want it set to a specific max pixel (or character, i.e,. em) width? If so, what width? And should it remain left justified?

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CarlsoFiorention commented 3 years ago

OK, the lines seem long but let’s keep them so for now, left justified helps.

On Aug 28, 2020, at 3:31 PM, James Chartrand notifications@github.com wrote:

The paragraph doesn’t have a specific width - it stretches to fit the page, with margins of 12.5% on either side.

On Aug 28, 2020, at 4:23 PM, Carlos Fiorentino notifications@github.com wrote:

Please remain it left justified. Whats the current with of the paragraph?

On Aug 28, 2020, at 2:15 PM, James Chartrand notifications@github.com wrote:

@CarlsoFiorention https://github.com/CarlsoFiorention I made the changes you requested, although I'm not sure that I understood the:

"The body text is too long, please reduce the width of the paragraph 25% shorter "

I increased the margins on either side of the abstract by 12.5% each. Maybe you don't want it centred? But then it also kind of depends on big the user opens their browser? Did you want it set to a specific max pixel (or character, i.e,. em) width? If so, what width? And should it remain left justified?

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jchartrand commented 3 years ago

Ok, left margin has been removed.

danydvd commented 3 years ago

@sfarnel @jchartrand @CarlsoFiorention the new index is ready at http://206.167.181.124:8983/solr/#/CanLink-new/query.

Note that this data does not include U of A. We have 80720 items.

P.S the language issue is now solved. All are using "http://id.loc.gov/vocabulary/languages/"

jchartrand commented 3 years ago

@danydvd @sfarnel @CarlsoFiorention

I've created yet another column -- Parked (pending discussion -- in the project board:

https://github.com/jchartrand/can-link/projects/1

And moved this issue in there, pending discusson/decisions on:

jchartrand commented 3 years ago

Thanks Danoosh,

It looks like there are two new fields:

department (with 52724 records having a value for this field) discipline (with 4197 records having a value for this field)

Should these go on the thesis page and/or elsewhere (e.g., as a search filter/dropdown)?

I’m not sure what you meant when you said this doesn’t have U of A items? Are we going to combine indexes?

James

On Aug 28, 2020, at 6:43 PM, Danoosh Davoodi notifications@github.com wrote:

@sfarnel @jchartrand @CarlsoFiorention the new index is ready at http://206.167.181.124:8983/solr/#/CanLink-new/query.

Note that this data does not include U of A. We have 80720 items.

P.S the language issue is now solved. All are using "http://id.loc.gov/vocabulary/languages/"

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub, or unsubscribe.

sfarnel commented 3 years ago

Thanks Danoosh. I don't see supervisor or supervisor_url here, but we'd agreed to add them since we have it in some data. Thanks!

On Fri, Aug 28, 2020 at 4:43 PM Danoosh Davoodi notifications@github.com wrote:

@sfarnel https://github.com/sfarnel @jchartrand https://github.com/jchartrand @CarlsoFiorention https://github.com/CarlsoFiorention the new index is ready at http://206.167.181.124:8983/solr/#/CanLink-new/query.

Note that this data does not include U of A. We have 80720 items.

P.S the language issue is now solved. All are using " http://id.loc.gov/vocabulary/languages/"

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-- Sharon Farnel she/her Head, Metadata Strategies University of Alberta Library sharon.farnel@ualberta.ca | 780-492-3685

The University of Alberta is situated on traditional Treaty 6 territory and homeland of the Métis peoples. Amiskwaciwâskahikan / ᐊᒥᐢᑲᐧᒋᕀᐋᐧᐢᑲᐦᐃᑲᐣ / Edmonton

sfarnel commented 3 years ago

Thanks James. Because department, discipline, and supervisor are things we don't have across all items at the moment, we had left them off of the filtering/visualization until we determined if we could enhance them in time, and how. So for now these would be fields that could be included on the item page when available, but not used for widgets or filtering at the moment.

On Fri, Aug 28, 2020 at 4:58 PM James Chartrand notifications@github.com wrote:

Thanks Danoosh,

It looks like there are two new fields:

department (with 52724 records having a value for this field) discipline (with 4197 records having a value for this field)

Should these go on the thesis page and/or elsewhere (e.g., as a search filter/dropdown)?

I’m not sure what you meant when you said this doesn’t have U of A items? Are we going to combine indexes?

James

On Aug 28, 2020, at 6:43 PM, Danoosh Davoodi notifications@github.com wrote:

@sfarnel @jchartrand @CarlsoFiorention the new index is ready at http://206.167.181.124:8983/solr/#/CanLink-new/query.

Note that this data does not include U of A. We have 80720 items.

P.S the language issue is now solved. All are using " http://id.loc.gov/vocabulary/languages/"

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub, or unsubscribe.

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub https://github.com/jchartrand/can-link/issues/6#issuecomment-683180869, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABD26TES5HIMV56VI65MBGDSDAZA7ANCNFSM4P7YXHXQ .

-- Sharon Farnel she/her Head, Metadata Strategies University of Alberta Library sharon.farnel@ualberta.ca | 780-492-3685

The University of Alberta is situated on traditional Treaty 6 territory and homeland of the Métis peoples. Amiskwaciwâskahikan / ᐊᒥᐢᑲᐧᒋᕀᐋᐧᐢᑲᐦᐃᑲᐣ / Edmonton

sfarnel commented 3 years ago

@danydvd we should also include in the Solr index the link back to the item in the original institutional repository.

sfarnel commented 3 years ago

@danydvd can you confirm that the additional data fields are in Solr? @jchartrand once this is confirmed we would need to have these displayed on the item page so we can test that. Thanks!

jchartrand commented 3 years ago

The blocker here for me is that we have universities missing in the universities ‘mapping’ file (that maps the linked data URI for each university to it’s display name and lat/long coordinates), and those missing entries break the site when I update to a newer SOLR core.

I think we were going to move this universities mapping file onto the server to more easily allow ongoing additions to the file (including the new ones), but for now I could just add the new universities to the file I have, to let us move forward. It wouldn’t be hard for me, and the new entries would eventually have to be added to the server file anyhow, so it wouldn’t be wasted time.

On Sep 2, 2020, at 9:28 AM, Sharon Farnel notifications@github.com wrote:

@danydvd https://github.com/danydvd can you confirm that the additional data fields are in Solr? @jchartrand https://github.com/jchartrand once this is confirmed we would need to have these displayed on the item page so we can test that. Thanks!

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sfarnel commented 3 years ago

Thanks @jc let's do that for now. I will work with @danydvd to get that file moved to the server and updated accordingly.

sfarnel commented 3 years ago

@danydvd @jchartrand can we have an update on the status of additional Solr fields being available in the new core so we can start working on their display on item record pages? Thanks!

jchartrand commented 3 years ago

Another one for @danydvd I think.

I can use whatever fields are in the core, and it looks like some records now have advisor, department, and discipline, but I kind of had a vague memory that more records were still to be populated with those fields, before I should add them to the full thesis record page?

On Sep 4, 2020, at 10:08 AM, Sharon Farnel notifications@github.com wrote:

@danydvd https://github.com/danydvd @jchartrand https://github.com/jchartrand can we have an update on the status of additional Solr fields being available in the new core so we can start working on their display on item record pages? Thanks!

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sfarnel commented 3 years ago

Thanks James. Indeed, as we ingest more data these fields will become more often populated for different datasets. Because they are more inconsistently available in the data now, we will not include widgets for them, but I would like us to start displaying them when we have them as they do enrich the user experience. I very much want this in place in the application so that as we enhance the data (some of which is likely to happen after we no longer have your or Carlos's time) we will be able to easily leverage it. @danydvd we also need to index the url back to the original item in the home repository so this can also be added to the item level page.

jchartrand commented 3 years ago

I can easily add the three new fields (dept, discipline, advisor) to the item level page (maybe an hour or two work), with headings for those (since they are maybe less obvious than other fields like year, author, title, but also to differentiate the advisor from the author, the discipline from the subject fields). I can hide the headings if no data is available or alternatively include the heading but show ’N/A’ or something like that. The advantage of including the headings (even if data isn’t available for an item) is that we still convey something meaningful: that there is a field with that name, but this record doesn’t have data for it.

Shall I add these three fields, and if so:

Should these three new fields be added to the search form as well? That would take longer, especially if you want autosuggest.

On Sep 4, 2020, at 10:34 AM, Sharon Farnel notifications@github.com wrote:

Thanks James. Indeed, as we ingest more data these fields will become more often populated for different datasets. Because they are more inconsistently available in the data now, we will not include widgets for them, but I would like us to start displaying them when we have them as they do enrich the user experience. I very much want this in place in the application so that as we enhance the data (some of which is likely to happen after we no longer have your or Carlos's time) we will be able to easily leverage it. @danydvd https://github.com/danydvd we also need to index the url back to the original item in the home repository so this can also be added to the item level page.

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jchartrand commented 3 years ago

I meant to also say that it looks like there are fourteen records that have all three new fields, and here they are, so you can get a sense of the kind of data in there:

{
  "responseHeader":{
    "status":0,
    "QTime":0,
    "params":{
      "q":"advisor:* AND department:* and discipline:*",
      "rows":"14",
      "_":"1599232484611"}},
  "response":{"numFound":14,"start":0,"docs":[
      {
        "id":"http://canlink.library.ualberta.ca/thesis/86ce9c14ffdd0bd6cef2fb8f73de9492",
        "year":[2008],
        "title":["Identifying Genes That Regulate Secondary Growth In Poplar"],
        "institution":["http://canlink.library.ualberta.ca/institution/Queen's_University"],
        "creator_url":["http://canlink.library.ualberta.ca/person/1cdf693f28bc9c1be8364663f5ccbeba"],
        "creator":["Bush Michael John"],
        "lang":["http://id.loc.gov/vocabulary/languages/eng"],
        "advisor":["http://canlink.library.ualberta.ca/person/e64b5354e6833af4e52bcb11c8d9424d"],
        "advisor_name":["Han, Shuyou."],
        "creator_first":["Michael John"],
        "creator_last":["Bush"],
        "degree":["Master"],
        "department":["['Department of Biology.']"],
        "discipline":["Biology"],
        "subject":["poplar",
          "populus",
          "vascular cambium"],
        "abstract":["Plant growth and development is largely controlled in regions of totipotential cells around the plant body called meristems. The well characterized shoot and root apical meristems are responsible for vertical growth, in which many key players have been well studied.  Lateral (secondary) growth is controlled by the vascular and cork cambiums, which are much less understood. A rapid growth of interest in a new model angiosperm tree, poplar, has facilitated the study of the two cambiums, specifically into their regulation at the genomic and proteomic levels. This study describes recent work carried out to explore the genetic regulation of secondary growth in poplar. Two genes have been identified that were previously not associated with the process of secondary growth. The first, a gene lacking annotation (FM#2), was identified through the investigation of a mutant from an activation-tagged population of poplar. This mutant showed aberrant secondary growth, with an increase in the phloem:xylem ratio. It also developed a thick, rough bark, and was subsequently named corky. Constructs to recapitulate this phenotype have been produced to allow the link between the gene FM#2 and the corky phenotype to be firmly established. The second gene was identified through a reverse genetics strategy to test if the Arabidopsis shoot apical meristem regulator, CLAVATA1 also played a role in the regulation of the vascular cambium. When it was downregulated in Arabidopsis, a significant increase in secondary growth was observed. Antisense and hairpin-RNAi constructs were produced to attempt downregulation of the gene in poplar using both traditional Agrobacterium-mediated transformations, and the recently developed strategy of induced somatic sector analysis."],
        "_version_":1676744347149664256},
      {
        "id":"http://canlink.library.ualberta.ca/thesis/9ad29140b2807231afcce4ba3713cfa7",
        "year":[2008],
        "title":["A novel role for Calpain 4 in podosome assembly"],
        "institution":["http://canlink.library.ualberta.ca/institution/Queen's_University"],
        "creator_url":["http://canlink.library.ualberta.ca/person/deb7868b458cd210b974919a2c4cd9ac"],
        "creator":["Dowler Thomas Riley"],
        "lang":["http://id.loc.gov/vocabulary/languages/eng"],
        "advisor":["http://canlink.library.ualberta.ca/person/677a59d4e30c47e19cf83bec8aa43d56"],
        "advisor_name":["Mak, Alan S."],
        "creator_first":["Thomas Riley"],
        "creator_last":["Dowler"],
        "degree":["Master"],
        "department":["['Department of Biochemistry.']"],
        "discipline":["Biochemistry"],
        "subject":["calpain",
          "src",
          "dorsal ruffles",
          "mouse embryonic fibroblast",
          "calpain 4",
          "pix"],
        "abstract":["Podosomes are adhesive and invasive structures which may play an important role in numerous physiological and pathological conditions including angiogenesis, atherosclerosis, and cancer metastasis.  Recently, the cysteine protease m-calpain (m-Capn) has been shown to cleave cortactin, an integral component of the podosomal F-actin core, as well as various proteins found in the peripheral adhesive region leading to the disassembly of these dynamic structures.  In this study, I investigated whether Capn plays a role in the formation of podosomes downstream of c-Src.  I show that: 1) phorbol-12, 13-dibutyrate (PDBu) as well as c-Src-Y527F expression induces podosome formation in mouse embryonic fibroblasts; 2) PDBu- and constitutively active c-Src-induced podosome formation is inhibited by the knockout of the m- and Mu-Capn small regulatory subunit Capn4 in mouse embryonic fibroblasts  (Capn4-/-), but is partially restored by re-expression of Capn4; 3) Capn4 localizes to podosomes; and 4) Inhibition of m- and Mu-Capn proteolytic activity by the cell permeable calpain inhibitors has little effect on the formation of podosomes downstream of active c-Src.  I conclude that Capn4 may play a role in the assembly phase of podosomes independent of calpain proteolytic activity.  Work done in collaboration to determine a possible mechanism of action for the role of Capn4 in podosome assembly indicates that a possible binding partner of Capn4, β-PIX, co-localizes with, and shows in vivo association with Capn4.  Furthermore, β-PIX and Capn4 bind directly in vitro in the presence of Ca2+.  We conclude that Capn4 plays a role in podosome assembly, and this role may be through direct interaction with β-PIX in a calcium-dependent manner."],
        "_version_":1676744347722186754},
      {
        "id":"http://canlink.library.ualberta.ca/thesis/c63e62d8334016cbfeb5ec52d289b672",
        "year":[2008],
        "title":["Measurement reliability and effect of hip strengthening exercises in knee osteoarthritis"],
        "institution":["http://canlink.library.ualberta.ca/institution/Queen's_University"],
        "creator_url":["http://canlink.library.ualberta.ca/person/01e457553416edd788caeaae636ec9aa"],
        "creator":["Sled Elizabeth Anne"],
        "lang":["http://id.loc.gov/vocabulary/languages/eng"],
        "advisor":["http://canlink.library.ualberta.ca/person/1473eb2f5a65029f9442eace32d44db3"],
        "advisor_name":["Olney, Sandra Jean,"],
        "creator_first":["Elizabeth Anne"],
        "creator_last":["Sled"],
        "degree":["PhD"],
        "department":["['School of Rehabilitation Therapy.']"],
        "discipline":["Rehabilitation Science"],
        "subject":["osteoarthritis",
          "muscle strength",
          "knee"],
        "abstract":["The progression of knee osteoarthritis (OA), the most common cause of physical disability in older adults, is influenced by muscular and biomechanical factors.  Reliability of muscular and biomechanical measures, including knee muscle strength and limb alignment, is critical.  Furthermore, conservative interventions that slow the course of OA disease progression and prevent disability are urgently needed.  The objectives of this thesis were to:  1) investigate the reliability of measures of knee muscle strength and alignment in persons with knee OA, and 2) determine the influence of an exercise intervention targeting hip muscles on knee joint loading in those with medial knee OA. In the first study reliability of knee muscle strength measures was evaluated within one testing session in 40 persons with knee OA.  Isometric and isokinetic peak torque values for the quadriceps and hamstring muscles demonstrated high degrees of intra-session reliability.  Reliability of lower limb alignment measures was determined following a bone landmark-based approach with use of a computer program.  Excellent reliability coefficients were found which compared favorably with reliability of manual measures from schematics of limb deformities drawn with AutoCAD® software.  When the computer method was applied to 100 full-limb radiographs of persons with or at risk for knee OA, alignment measures demonstrated high inter- and intra-reader reliability. Hip muscle weakness may influence loading of the medial knee compartment.  Hip abductor strength was evaluated in 40 individuals with medial compartment knee OA in comparison to a control group of 40 healthy older adults. The effect of an 8-week home-based hip abductor strengthening program on the knee adduction moment was also assessed in this group with knee OA, compared with the control group which received no intervention.  Following the exercise program the OA group demonstrated improvements in hip abductor strength and functional performance on a sit-to-stand task.  There were no changes in the knee adduction moment.  Thus, hip muscle strengthening did not influence joint loading, but may improve function in persons with knee OA.  Results from this thesis provide increased understanding of knee OA, from muscular and biomechanical perspectives, in the areas of measurement reliability and exercise intervention."],
        "_version_":1676744348283174913},
      {
        "id":"http://canlink.library.ualberta.ca/thesis/ec1b0628fbcdaadcc95ef454d655c3ca",
        "year":[2008],
        "title":["Distinguishing between natural and anthropogenic sources of arsenic in soils from the Giant mine, Northwest Territories and the North Brookfield mine, Nova Scotia"],
        "institution":["http://canlink.library.ualberta.ca/institution/Queen's_University"],
        "creator_url":["http://canlink.library.ualberta.ca/person/355039973ec0fd779ea614549fb587b9"],
        "creator":["Wrye Lori Ann"],
        "lang":["http://id.loc.gov/vocabulary/languages/eng"],
        "advisor":["http://canlink.library.ualberta.ca/person/123a8f0e83119b950be11528aeb3ef3b"],
        "advisor_name":["Jamieson, Heather Edith,"],
        "creator_first":["Lori Ann"],
        "creator_last":["Wrye"],
        "degree":["Master"],
        "department":["['Department of Geological Sciences and Geological Engineering.']"],
        "discipline":["Geological Sciences & Geological Engineering"],
        "subject":["soils",
          "arsenic",
          "arsenic trioxide",
          "north brookfield mine, nova scotia",
          "giant mine, northwest territories",
          "gold roasting"],
        "abstract":["Anthropogenic and geogenic sources of arsenic (As) have been identified in mining-impacted soils from the Giant mine (1948-1999), NT and the North Brookfield mine (1886-1906), NS.  Both used roasting to extract gold from the arsenopyrite ore, decomposing it to As-bearing iron oxides (roaster oxides or RO) containing As, and releasing As3+-bearing arsenic trioxide (As2O3). Arsenic trioxide is considered highly soluble with the dissolved As3+ species being more mobile and toxic than other oxidation states. Soil profiles from the Giant mine show elevated As and antimony (Sb) at the surface (As=140-3300ppm) and decreasing concentrations with depth (As=22-600ppm).  Surface soils contain anthropogenically-derived As2O3 identified using synchrotron methods (MuXRD, MuXANES) and environmental SEM.  The persistence of As2O3 is attributed to Sb in As2O3 grains, dry climate and high organics in the soils. Anthropogenically-derived RO of maghemite (containing both As3+ and As5+) and natural arsenopyrite were observed.  Sequential selective extractions (SSE) from surface soils show between 20% and 75% of As extracted in the crystalline iron-oxide phase is attributed to As2O3 and RO, while at depth As is bound by organics in the weaker leaches.   North Brookfield mine soils show lower total As (2ppm to 45ppm) except near the roaster (4300ppm).  No As2O3 was identified, probably due to the smaller scale and age of the mine, lower organic content and the lack of Sb.  As-bearing phases include RO of hematite (As5+), As-rich rims on titanium-oxides, and As associated with clays and goethite.  Adjacent to the roaster, SSE show As was also in the amorphous iron-oxide phase, also shown by As in arsenopyrite weathering rims.  There are many differences between the North Brookfield and Giant mine soils including roasting techniques which produced different RO mineralogy, the scale of mining, climate, soil type, and the presence of As2O3.  Currently, the Giant property is not publically accessible but may become so in the future while the North Brookfield property is accessible.  Understanding the form and distribution of As phases is critical because of the potential risk to human and ecosystem health associated with ingestion of soil particles and their control on the total dissolved As in surface and groundwater."],
        "_version_":1676744348389081088},
      {
        "id":"http://canlink.library.ualberta.ca/thesis/272ebde0a4cc93a38b3673bf4389771b",
        "year":[1983],
        "title":["A report on the development and evaluation of a booklet entitled Growing up with asthma : a guide for parents"],
        "institution":["http://canlink.library.ualberta.ca/institution/Memorial_University_of_Newfoundland"],
        "creator_url":["http://canlink.library.ualberta.ca/person/57176540bcbc8f889b84b5e2ef0d1a4e"],
        "creator":["Marsh Marilyn"],
        "lang":["http://id.loc.gov/vocabulary/languages/eng"],
        "advisor":["http://canlink.library.ualberta.ca/person/ab300b61467e0c6a1c1a26948432cb40"],
        "advisor_name":["Marsh, Marilyn,"],
        "creator_first":["Marilyn"],
        "creator_last":["Marsh"],
        "degree":["MEd"],
        "department":["['Faculty of Education']"],
        "subject":["asthma",
          "asthma in children"],
        "_version_":1676744323380543489},
      {
        "id":"http://canlink.library.ualberta.ca/thesis/17f7bb10df7e60b95c35b6bb5619d057",
        "year":[1988],
        "title":["Development and evaluation of Evaluating primary music, a handbook on evaluation of primary music"],
        "institution":["http://canlink.library.ualberta.ca/institution/Memorial_University_of_Newfoundland"],
        "creator_url":["http://canlink.library.ualberta.ca/person/d86ef5f19ea7c0861a5b4672f8d4662a"],
        "creator":["Wicks Rhonda Louise"],
        "lang":["http://id.loc.gov/vocabulary/languages/eng"],
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