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ubccr / genesysv

Gene Exploration System for Variance
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Installation issue on Ubuntu 20.04 OS on Virtual Machine #8

Open moldach opened 4 years ago

moldach commented 4 years ago

I recommend that you start an installation from a clean ubuntu environment or do a test install on a virtualbox running Ubuntu as guest OS. I found that elasticsearch is now on version 7 and it came with Java bundled with it (I found it out using v7.6.2). However, it has some changes that make it incompatible with v6.3.0 used in our current GenESysV. I'm now in the process of migrating our code to work under recent versions of elasticsearch.

Hi @jianxinwang. I've done a test install on a (virtualbox running Ubuntu 20.04 OS.. I used pyenv for Python 3.6.0 and followed all of the instructions as they are in the README now.

I run into this error:

(venv) ubuntu@ubunu2004:~/GenESysV$ sudo apt-get install memcached
E: Could not get lock /var/lib/dpkg/lock-frontend. It is held by process 23998 (unattended-upgr)
N: Be aware that removing the lock file is not a solution and may break your system.
E: Unable to acquire the dpkg frontend lock (/var/lib/dpkg/lock-frontend), is another process using it?