ubccr / software-layer

CCR Software Layer
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Colabfold #257

Open PopeJohnXXIV opened 8 months ago

PopeJohnXXIV commented 8 months ago

Colabfold is very similar to alphafold but has some additional features such as the ability to select a specific template to use in predictions. A link to installation instructions is presented here: https://github.com/YoshitakaMo/localcolabfold. I believe that the main difficulty in installing this program is that it requires a conda enviroment.

dsajdak commented 7 months ago

This is on hold until a newer version of tensorflow is available so that we can upgrade to a newer version of Alphafold and Colabfold. There are several versions of colabfold that work with the necessary dependencies currently available in ccrsoft/2023.01; however despite successfully installing, they don't run due to a python library issue.