Closed vpsx closed 5 years ago
Jenkins Build 2 : time taken 1 hr 29 min Check the https://jenkins.planx-pla.net/job/Performance%20tests%20for%20uc-cdis/job/peregrine/job/PR-135/2/display/redirect
Test results: Passed: 109, Failed: 0, Skipped: 0
Test | Time (PR ) |
Time (master ) |
Diff |
---|---|---|---|
@ExportPerformanceTests @Performance: Export all nodes of type: aliquot | 0.279 | 0.222 | 0.06 |
@ExportPerformanceTests @Performance: Export all nodes of type: case | 0.334 | 0.251 | 0.08 |
@ExportPerformanceTests @Performance: Export all nodes of type: experiment | 0.319 | 0.421 | -0.10 |
@ExportPerformanceTests @Performance: Export all nodes of type: program | 0.058 | 0.089 | -0.03 |
@ExportPerformanceTests @Performance: Export all nodes of type: project | 0.048 | 0.08 | -0.03 |
@ExportPerformanceTests @Performance: Export all nodes of type: read_group | 0.38 | 0.453 | -0.07 |
@ExportPerformanceTests @Performance: Export all nodes of type: sample | 0.376 | 0.336 | 0.04 |
@ExportPerformanceTests @Performance: Exporting a record by ID on nodes of type: case | 0.278 | 0.254 | 0.02 |
@ExportPerformanceTests @Performance: Exporting a record by ID on nodes of type: experiment | 0.372 | 0.281 | 0.09 |
@ExportPerformanceTests @Performance: Exporting a record by ID on nodes of type: read_group | 0.175 | 0.06 | 0.11 |
@ExportPerformanceTests @Performance: Exporting a record by ID on nodes of type: read_group_qc | 0.118 | 0.079 | 0.04 |
@ExportPerformanceTests @Performance: Exporting a record by ID on nodes of type: sample | 0.144 | 0.183 | -0.04 |
@QueryPerformanceTests @Performance: Executing bottomUp query # 0 | 0.9 | 0.535 | 0.36 |
@QueryPerformanceTests @Performance: Executing bottomUp query # 1 | 0.701 | 0.498 | 0.20 |
@QueryPerformanceTests @Performance: Executing bottomUp query # 2 | 0.606 | 0.508 | 0.10 |
@QueryPerformanceTests @Performance: Executing bottomUp query # 3 | 0.606 | 0.403 | 0.20 |
@QueryPerformanceTests @Performance: Executing bottomUp query # 4 | 0.581 | 0.3 | 0.28 |
@QueryPerformanceTests @Performance: Executing bottomUp query # 5 | 0.398 | 0.235 | 0.16 |
@QueryPerformanceTests @Performance: Executing bottomUp query # 6 | 0.201 | 0.144 | 0.06 |
@QueryPerformanceTests @Performance: Executing bottomUp query # 7 | 0.157 | 0.061 | 0.10 |
@QueryPerformanceTests @Performance: Executing topDown query # 0 | 0.1 | 0.05 | 0.05 |
@QueryPerformanceTests @Performance: Executing topDown query # 1 | 0.087 | 0.067 | 0.02 |
@QueryPerformanceTests @Performance: Executing topDown query # 2 | 0.191 | 0.096 | 0.09 |
@QueryPerformanceTests @Performance: Executing topDown query # 3 | 0.211 | 0.149 | 0.06 |
@QueryPerformanceTests @Performance: Executing topDown query # 4 | 0.394 | 0.238 | 0.16 |
@QueryPerformanceTests @Performance: Executing topDown query # 5 | 0.388 | 0.308 | 0.08 |
@QueryPerformanceTests @Performance: Executing topDown query # 6 | 0.687 | 0.478 | 0.21 |
@QueryPerformanceTests @Performance: Executing topDown query # 7 | 0.699 | 0.613 | 0.09 |
@SubmissionPerformanceTests @Performance: Submission acknowledgement 100 | 2.383 | 1.988 | 0.39 |
@SubmissionPerformanceTests @Performance: Submission acknowledgement 1000 | 19.318 | 0.07 | 19.25 |
@SubmissionPerformanceTests @Performance: Submission aligned_reads_index 10 | 1.782 | 2.267 | -0.49 |
@SubmissionPerformanceTests @Performance: Submission aligned_reads_index 100 | 16.811 | 19.605 | -2.79 |
@SubmissionPerformanceTests @Performance: Submission aliquot 10 | 0.365 | 0.341 | 0.02 |
@SubmissionPerformanceTests @Performance: Submission case 10 | 0.444 | 0.344 | 0.10 |
@SubmissionPerformanceTests @Performance: Submission case 100 | 2.015 | 2.282 | -0.27 |
@SubmissionPerformanceTests @Performance: Submission clinical_test 10 | 0.336 | 0.359 | -0.02 |
@SubmissionPerformanceTests @Performance: Submission clinical_test 100 | 2.496 | 2.328 | 0.17 |
@SubmissionPerformanceTests @Performance: Submission core_metadata_collection 10 | 0.484 | 0.798 | -0.31 |
@SubmissionPerformanceTests @Performance: Submission core_metadata_collection 100 | 2.223 | 2.116 | 0.11 |
@SubmissionPerformanceTests @Performance: Submission demographic 10 | 0.342 | 0.405 | -0.06 |
@SubmissionPerformanceTests @Performance: Submission demographic 1000 | 23.212 | 0.145 | 23.07 |
@SubmissionPerformanceTests @Performance: Submission diagnosis 10 | 0.374 | 0.342 | 0.03 |
@SubmissionPerformanceTests @Performance: Submission diagnosis 100 | 2.961 | 2.479 | 0.48 |
@SubmissionPerformanceTests @Performance: Submission experiment 10 | 0.479 | 0.389 | 0.09 |
@SubmissionPerformanceTests @Performance: Submission experimental_metadata 10 | 1.98 | 2.166 | -0.19 |
@SubmissionPerformanceTests @Performance: Submission experimental_metadata 100 | 16.692 | 19.811 | -3.12 |
@SubmissionPerformanceTests @Performance: Submission exposure 10 | 0.452 | 0.296 | 0.16 |
@SubmissionPerformanceTests @Performance: Submission exposure 100 | 2.423 | 2.045 | 0.38 |
@SubmissionPerformanceTests @Performance: Submission exposure 1000 | 20.694 | 0.074 | 20.62 |
@SubmissionPerformanceTests @Performance: Submission family_history 10 | 0.321 | 0.372 | -0.05 |
@SubmissionPerformanceTests @Performance: Submission family_history 100 | 2.364 | 2.131 | 0.23 |
@SubmissionPerformanceTests @Performance: Submission keyword 100 | 2.298 | 1.95 | 0.35 |
@SubmissionPerformanceTests @Performance: Submission keyword 1000 | 19.398 | 0.037 | 19.36 |
@SubmissionPerformanceTests @Performance: Submission publication 10 | 0.383 | 0.321 | 0.06 |
@SubmissionPerformanceTests @Performance: Submission publication 100 | 2.299 | 1.954 | 0.35 |
@SubmissionPerformanceTests @Performance: Submission publication 1000 | 20.302 | 15.404 | 4.90 |
@SubmissionPerformanceTests @Performance: Submission read_group 10 | 0.362 | 0.326 | 0.04 |
@SubmissionPerformanceTests @Performance: Submission read_group 100 | 2.236 | 2.402 | -0.17 |
@SubmissionPerformanceTests @Performance: Submission read_group_qc 10 | 0.612 | 0.469 | 0.14 |
@SubmissionPerformanceTests @Performance: Submission read_group_qc 100 | 4.563 | 3.526 | 1.04 |
@SubmissionPerformanceTests @Performance: Submission sample 10 | 0.351 | 0.392 | -0.04 |
@SubmissionPerformanceTests @Performance: Submission sample 100 | 2.493 | 2.354 | 0.14 |
@SubmissionPerformanceTests @Performance: Submission slide 10 | 0.377 | 0.433 | -0.06 |
@SubmissionPerformanceTests @Performance: Submission slide 100 | 2.412 | 2.199 | 0.21 |
@SubmissionPerformanceTests @Performance: Submission slide_count 10 | 0.375 | 0.321 | 0.05 |
@SubmissionPerformanceTests @Performance: Submission slide_count 100 | 2.073 | 2.215 | -0.14 |
@SubmissionPerformanceTests @Performance: Submission slide_image 10 | 1.817 | 2.162 | -0.34 |
@SubmissionPerformanceTests @Performance: Submission slide_image 100 | 16.892 | 18.957 | -2.07 |
@SubmissionPerformanceTests @Performance: Submission slide_image 1000 | 44.816 | 0.079 | 44.74 |
@SubmissionPerformanceTests @Performance: Submission submitted_aligned_reads 10 | 2.381 | 2.17 | 0.21 |
@SubmissionPerformanceTests @Performance: Submission submitted_aligned_reads 100 | 17.242 | 22.228 | -4.99 |
@SubmissionPerformanceTests @Performance: Submission submitted_copy_number 10 | 1.707 | 2.084 | -0.38 |
@SubmissionPerformanceTests @Performance: Submission submitted_copy_number 100 | 15.9 | 18.403 | -2.50 |
@SubmissionPerformanceTests @Performance: Submission submitted_copy_number 1000 | 45.216 | 0.131 | 45.08 |
@SubmissionPerformanceTests @Performance: Submission submitted_methylation 10 | 1.699 | 2.438 | -0.74 |
@SubmissionPerformanceTests @Performance: Submission submitted_methylation 100 | 16.053 | 21.872 | -5.82 |
@SubmissionPerformanceTests @Performance: Submission submitted_somatic_mutation 10 | 1.753 | 2.188 | -0.43 |
@SubmissionPerformanceTests @Performance: Submission submitted_somatic_mutation 100 | 16.36 | 19.055 | -2.69 |
@SubmissionPerformanceTests @Performance: Submission submitted_somatic_mutation 1000 | 45.016 | 0.049 | 44.97 |
@SubmissionPerformanceTests @Performance: Submission submitted_unaligned_reads 10 | 1.989 | 2.118 | -0.13 |
@SubmissionPerformanceTests @Performance: Submission submitted_unaligned_reads 100 | 17.497 | 20.352 | -2.85 |
@SubmissionPerformanceTests @Performance: Submission treatment 100 | 2.302 | 2.063 | 0.24 |
@SubmissionPerformanceTests @Performance: Submission treatment 1000 | 21.315 | 20.171 | 1.14 |
Jenkins Build 3 : time taken 1 hr 20 min Check the https://jenkins.planx-pla.net/job/Performance%20tests%20for%20uc-cdis/job/peregrine/job/PR-135/3/display/redirect
Test results: Passed: 109, Failed: 0, Skipped: 0
Test | Time (PR ) |
Time (master ) |
Diff |
---|---|---|---|
@ExportPerformanceTests @Performance: Export all nodes of type: case | 0.213 | 0.251 | -0.04 |
@ExportPerformanceTests @Performance: Export all nodes of type: experiment | 0.272 | 0.421 | -0.15 |
@ExportPerformanceTests @Performance: Export all nodes of type: program | 0.061 | 0.089 | -0.03 |
@ExportPerformanceTests @Performance: Export all nodes of type: project | 0.044 | 0.08 | -0.04 |
@ExportPerformanceTests @Performance: Export all nodes of type: read_group | 0.4 | 0.453 | -0.05 |
@ExportPerformanceTests @Performance: Export all nodes of type: read_group_qc | 0.271 | 0.1 | 0.17 |
@ExportPerformanceTests @Performance: Export all nodes of type: sample | 0.507 | 0.336 | 0.17 |
@ExportPerformanceTests @Performance: Exporting a record by ID on nodes of type: aliquot | 0.172 | 0.132 | 0.04 |
@ExportPerformanceTests @Performance: Exporting a record by ID on nodes of type: case | 0.196 | 0.254 | -0.06 |
@ExportPerformanceTests @Performance: Exporting a record by ID on nodes of type: experiment | 0.188 | 0.281 | -0.09 |
@ExportPerformanceTests @Performance: Exporting a record by ID on nodes of type: read_group | 0.071 | 0.06 | 0.01 |
@ExportPerformanceTests @Performance: Exporting a record by ID on nodes of type: sample | 0.093 | 0.183 | -0.09 |
@QueryPerformanceTests @Performance: Executing bottomUp query # 0 | 0.794 | 0.535 | 0.26 |
@QueryPerformanceTests @Performance: Executing bottomUp query # 1 | 0.775 | 0.498 | 0.28 |
@QueryPerformanceTests @Performance: Executing bottomUp query # 2 | 0.769 | 0.508 | 0.26 |
@QueryPerformanceTests @Performance: Executing bottomUp query # 3 | 0.572 | 0.403 | 0.17 |
@QueryPerformanceTests @Performance: Executing bottomUp query # 4 | 0.489 | 0.3 | 0.19 |
@QueryPerformanceTests @Performance: Executing bottomUp query # 5 | 0.486 | 0.235 | 0.25 |
@QueryPerformanceTests @Performance: Executing bottomUp query # 6 | 0.272 | 0.144 | 0.13 |
@QueryPerformanceTests @Performance: Executing bottomUp query # 7 | 0.177 | 0.061 | 0.12 |
@QueryPerformanceTests @Performance: Executing topDown query # 0 | 0.178 | 0.05 | 0.13 |
@QueryPerformanceTests @Performance: Executing topDown query # 1 | 0.187 | 0.067 | 0.12 |
@QueryPerformanceTests @Performance: Executing topDown query # 2 | 0.259 | 0.096 | 0.16 |
@QueryPerformanceTests @Performance: Executing topDown query # 3 | 0.194 | 0.149 | 0.05 |
@QueryPerformanceTests @Performance: Executing topDown query # 4 | 0.29 | 0.238 | 0.05 |
@QueryPerformanceTests @Performance: Executing topDown query # 5 | 0.577 | 0.308 | 0.27 |
@QueryPerformanceTests @Performance: Executing topDown query # 6 | 0.699 | 0.478 | 0.22 |
@QueryPerformanceTests @Performance: Executing topDown query # 7 | 0.798 | 0.613 | 0.19 |
@SubmissionPerformanceTests @Performance: Submission acknowledgement 1000 | 19.219 | 0.07 | 19.15 |
@SubmissionPerformanceTests @Performance: Submission aligned_reads_index 10 | 1.766 | 2.267 | -0.50 |
@SubmissionPerformanceTests @Performance: Submission aligned_reads_index 100 | 16.398 | 19.605 | -3.21 |
@SubmissionPerformanceTests @Performance: Submission aliquot 100 | 1.918 | 2.109 | -0.19 |
@SubmissionPerformanceTests @Performance: Submission aliquot 1000 | 18.915 | 21.108 | -2.19 |
@SubmissionPerformanceTests @Performance: Submission case 10 | 0.375 | 0.344 | 0.03 |
@SubmissionPerformanceTests @Performance: Submission clinical_test 10 | 0.385 | 0.359 | 0.03 |
@SubmissionPerformanceTests @Performance: Submission core_metadata_collection 10 | 0.724 | 0.798 | -0.07 |
@SubmissionPerformanceTests @Performance: Submission demographic 10 | 0.345 | 0.405 | -0.06 |
@SubmissionPerformanceTests @Performance: Submission demographic 1000 | 21.776 | 0.145 | 21.63 |
@SubmissionPerformanceTests @Performance: Submission diagnosis 10 | 0.479 | 0.342 | 0.14 |
@SubmissionPerformanceTests @Performance: Submission experiment 10 | 0.454 | 0.389 | 0.06 |
@SubmissionPerformanceTests @Performance: Submission experiment 100 | 2.531 | 2.155 | 0.38 |
@SubmissionPerformanceTests @Performance: Submission experimental_metadata 10 | 1.848 | 2.166 | -0.32 |
@SubmissionPerformanceTests @Performance: Submission experimental_metadata 100 | 16.495 | 19.811 | -3.32 |
@SubmissionPerformanceTests @Performance: Submission exposure 10 | 0.365 | 0.296 | 0.07 |
@SubmissionPerformanceTests @Performance: Submission exposure 1000 | 19.827 | 0.074 | 19.75 |
@SubmissionPerformanceTests @Performance: Submission family_history 10 | 0.336 | 0.372 | -0.04 |
@SubmissionPerformanceTests @Performance: Submission keyword 1000 | 18.525 | 0.037 | 18.49 |
@SubmissionPerformanceTests @Performance: Submission publication 10 | 0.286 | 0.321 | -0.03 |
@SubmissionPerformanceTests @Performance: Submission publication 1000 | 18.837 | 15.404 | 3.43 |
@SubmissionPerformanceTests @Performance: Submission read_group_qc 1000 | 24.672 | 22.955 | 1.72 |
@SubmissionPerformanceTests @Performance: Submission sample 10 | 0.363 | 0.392 | -0.03 |
@SubmissionPerformanceTests @Performance: Submission sample 100 | 2.173 | 2.354 | -0.18 |
@SubmissionPerformanceTests @Performance: Submission slide 10 | 0.365 | 0.433 | -0.07 |
@SubmissionPerformanceTests @Performance: Submission slide 1000 | 20.507 | 22.332 | -1.83 |
@SubmissionPerformanceTests @Performance: Submission slide_count 100 | 1.968 | 2.215 | -0.25 |
@SubmissionPerformanceTests @Performance: Submission slide_image 10 | 1.961 | 2.162 | -0.20 |
@SubmissionPerformanceTests @Performance: Submission slide_image 100 | 16.586 | 18.957 | -2.37 |
@SubmissionPerformanceTests @Performance: Submission slide_image 1000 | 44.966 | 0.079 | 44.89 |
@SubmissionPerformanceTests @Performance: Submission submitted_aligned_reads 10 | 1.831 | 2.17 | -0.34 |
@SubmissionPerformanceTests @Performance: Submission submitted_aligned_reads 100 | 16.822 | 22.228 | -5.41 |
@SubmissionPerformanceTests @Performance: Submission submitted_copy_number 10 | 1.644 | 2.084 | -0.44 |
@SubmissionPerformanceTests @Performance: Submission submitted_copy_number 100 | 16.104 | 18.403 | -2.30 |
@SubmissionPerformanceTests @Performance: Submission submitted_copy_number 1000 | 45.107 | 0.131 | 44.98 |
@SubmissionPerformanceTests @Performance: Submission submitted_methylation 10 | 2.06 | 2.438 | -0.38 |
@SubmissionPerformanceTests @Performance: Submission submitted_methylation 100 | 16.612 | 21.872 | -5.26 |
@SubmissionPerformanceTests @Performance: Submission submitted_somatic_mutation 10 | 1.751 | 2.188 | -0.44 |
@SubmissionPerformanceTests @Performance: Submission submitted_somatic_mutation 100 | 16.475 | 19.055 | -2.58 |
@SubmissionPerformanceTests @Performance: Submission submitted_somatic_mutation 1000 | 45.008 | 0.049 | 44.96 |
@SubmissionPerformanceTests @Performance: Submission submitted_unaligned_reads 10 | 1.757 | 2.118 | -0.36 |
@SubmissionPerformanceTests @Performance: Submission submitted_unaligned_reads 100 | 16.387 | 20.352 | -3.97 |
@SubmissionPerformanceTests @Performance: Submission treatment 10 | 0.306 | 0.323 | -0.02 |
@SubmissionPerformanceTests @Performance: Submission treatment 100 | 2.169 | 2.063 | 0.11 |
Remove signpost from peregrine dependencies and code
Improvements
Dependency updates
Deployment changes