Fix/update flask - Githubissues

uc-cdis / peregrine

GraphQL search API service

Apache License 2.0

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Fix/update flask #205

Closed george42-ctds closed 9 months ago

george42-ctds commented 10 months ago

Jira Ticket: PPS-629

New Features

Breaking Changes

Bug Fixes

Improvements

Dependency updates

Upgrade flask

Deployment changes

github-actions[bot] commented 10 months ago

The style in this PR agrees with black. :heavy_check_mark:

This formatting comment was generated automatically by a script in uc-cdis/wool.

paulineribeyre commented 9 months ago

Sheepdog/Indexd have not been updated yet to a more recent version of Flask but this needs to be merged. Temporarily removes Sheepdog from the dev dependencies. The unit tests fail as expected, but I think the integration tests cover enough of the peregrine/sheepdog interaction (will be fixed in PPS-655)

Also ignoring Snyk request to upgrade pyyaml for now (will be fixed in PXP-11163)