Create and use de-identified research databases. Preprocess, extract text, anonymise/de-identify, link, apply natural language processing, query for research, manage consent for contact.
Thanks. Tweaked a bit and now present as branch nlp_lft_dev. Feel free to test -- in particular, when you install CRATE, there is now a tool called crate_run_crate_nlp_demo (use crate_run_crate_nlp_demo --help for help). For example, crate_run_crate_nlp_demo - --processors ALT Albumin AlkPhos Bilirubin GammaGT will take input from stdin (you typing). Type STOP on a line by itself to submit each chunk of text. Once we're happy, we can merge to master from that. Also bumps to v0.19.1.
Thanks. Tweaked a bit and now present as branch
nlp_lft_dev. Feel free to test -- in particular, when you install CRATE, there is now a tool calledcrate_run_crate_nlp_demo(usecrate_run_crate_nlp_demo --helpfor help). For example,crate_run_crate_nlp_demo - --processors ALT Albumin AlkPhos Bilirubin GammaGTwill take input from stdin (you typing). TypeSTOPon a line by itself to submit each chunk of text. Once we're happy, we can merge to master from that. Also bumps to v0.19.1.