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uci-cbcl / UFold

MIT License
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ss_label dimension #21

Open CatIIIIIIII opened 2 years ago

CatIIIIIIII commented 2 years ago

Hi, I am wandering why ss_label is a 600x3 matrix? I know that 600 is sequence length after cutting, and what the 3 columns represent?

BTW, your work is awesome!

CatIIIIIIII commented 2 years ago

OK, it seems that it is not used for training 0.0

sfsdfd62 commented 2 years ago

It is a way of annotation. [1,0,0] stands for nucleotides that are not paired (. in dot-bracket annotation),[0,1,0] stands for ( while [0,0,1] stands for ) .You may refer to dot-bracket annotation to understand this.