Moving to new `jaxdf`

[astanziola]

Moving to new jaxdf version, which is based on equinox and the latest major plum release.

Others changes:

• Added logger #214
• Fixes #218
• Added a setting class for time domain simulations. This fixes #219 and will be used to choose the adjoint type when jwave is integrated with diffrax

[codecov[bot]]

Codecov Report

Attention: 8 lines in your changes are missing coverage. Please review.

Comparison is base (6884aff) 80.34% compared to head (fb58c65) 80.61%.

Files	Patch %	Lines
jwave/geometry.py	89.18%	8 Missing :warning:

Additional details and impacted files

```diff @@ Coverage Diff @@ ## version-0.2 #220 +/- ## =============================================== + Coverage 80.34% 80.61% +0.26% =============================================== Files 14 15 +1 Lines 1155 1202 +47 =============================================== + Hits 928 969 +41 - Misses 227 233 +6 ```

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