[Feature]: Add base class for INFER classes - Githubissues

ucl-cssb / MIMIC

Modelling and Inference of MICrobiomes Project (MIMIC) is a Python package dedicated to simulate, model, and predict microbial communities interactions

MIT License

5 stars 0 forks source link

[Feature]: Add base class for INFER classes #72

Closed Fontanapink closed 2 weeks ago

Fontanapink commented 2 weeks ago

This PR adds a base class for the infer classes, and modifies the VAR_Infer class to work with the base class. This PR also has all the example files re-run to test for errors.

Description of the changes:

Fixes https://github.com/ucl-cssb/MIMIC/issues/68, fixes #68

I have done the following to make this PR ready for review:

[x] I have re-based my branch on the latest master branch
[x] I have added necessary documentation (if appropriate)
[x] I have commented my code, particularly in hard-to-understand areas
[ ] I have assigned a reviewer to this PR

For the reviewer, make sure this PR meets these criteria before merging:

[ ] New code has comments
[ ] New code has tests (if appropriate)
[ ] New code has documentation (if appropriate)
[ ] New code has been reviewed by at least one other person