SuStaIn in pymc3, and Variational Inference?

ucl-pond / pySuStaIn

Subtype and Stage Inference (SuStaIn) algorithm with an example using simulated data.

MIT License

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SuStaIn in pymc3, and Variational Inference? #13

Closed Sinha-Ujjawal closed 2 years ago

Sinha-Ujjawal commented 3 years ago

Can we model SuStaIn in probabilistic modelling library like pymc3, also can we use Variational Inference instead of MCMC?

pawij commented 3 years ago

Hi Sinha,

Thanks for the question. Yes we could variational inference and plan to implement this in a future release. As for pymc3, I don't have any experience with it so can't comment.

Peter