uclahs-cds / pipeline-align-DNA

Nextflow pipeline to align paired DNA FASTQs and sort, mark duplicates, and index resulting alignment
https://uclahs-cds.github.io/pipeline-align-DNA/
GNU General Public License v2.0
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Update dependabot to group common submodules #322

Closed nwiltsie closed 5 months ago

nwiltsie commented 5 months ago

Description

This updates the dependabot configuration to group updates for pipeline-Nextflow-config and pipeline-Nextflow-module into a single PR. That should greatly reduce the testing burden to keep the submodules up-to-date.

See https://github.com/uclahs-cds/pipeline-recalibrate-BAM/pull/79 (and the resulting https://github.com/uclahs-cds/pipeline-recalibrate-BAM/pull/80) for an example of this configuration working.