Closed lydiayliu closed 2 years ago
https://github.com/uclahs-cds/pipeline-call-NonCanonicalPeptide/blob/fe350f6c5c002f209a50f905175aab3b23fcc755/modules/merge_fasta.nf#L10
It should be merge_variant_noncoding like in the rest of the pipeline
merge_variant_noncoding
Results in WARN: Access to undefined parametercombine_variant_noncoding-- Initialise it to a default value eg.params.combine_variant_noncoding = some_value``
WARN: Access to undefined parameter
-- Initialise it to a default value eg.
https://github.com/uclahs-cds/pipeline-call-NonCanonicalPeptide/blob/fe350f6c5c002f209a50f905175aab3b23fcc755/modules/merge_fasta.nf#L10
It should be
merge_variant_noncodinglike in the rest of the pipelineResults in
WARN: Access to undefined parametercombine_variant_noncoding-- Initialise it to a default value eg.params.combine_variant_noncoding = some_value``