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uclahs-cds / pipeline-call-gSV

Nextflow pipeline to call germline structural variants and copy number variants using DELLY and Manta
https://uclahs-cds.github.io/pipeline-call-gSV/
GNU General Public License v2.0
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Missing call to methods.setup_docker_cpus() #128

Closed nwiltsie closed 7 months ago

nwiltsie commented 7 months ago

This pipeline does not call methods.setup_docker_cpus(). Using that method is important to ensure proper CPU allocation for docker images - see https://github.com/uclahs-cds/pipeline-Nextflow-config/pull/25 for more details.