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uclahs-cds / pipeline-call-gSV

Nextflow pipeline to call germline structural variants and copy number variants using DELLY and Manta
https://uclahs-cds.github.io/pipeline-call-gSV/
GNU General Public License v2.0
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Bump the pipeline-submodules group across 1 directory with 2 updates #175

Open dependabot[bot] opened 1 month ago

dependabot[bot] commented 1 month ago

Bumps the pipeline-submodules group with 2 updates in the / directory: external/pipeline-Nextflow-module and external/pipeline-Nextflow-config.

Updates external/pipeline-Nextflow-module from 1cfa9fa to b1d7a78

Commits
  • b1d7a78 Merge pull request #46 from uclahs-cds/sfitz-capture-logs-false
  • 9f07b9f Add 'ext capture_logs: false' to remaining processes
  • See full diff in compare view


Updates external/pipeline-Nextflow-config from a4e99e0 to da0541d

Commits
  • da0541d Merge pull request #72 from uclahs-cds/nwiltsie-update-reference-paths
  • 153cf6a Update common_methods.config
  • 750564d Update reference paths
  • 23b7b4e Merge pull request #71 from uclahs-cds/yashpatel-fix-choices
  • b52420d Remove redundant check
  • eb8cc65 Update CHANGELOG
  • 3454bc4 Add fix to properly check choices when given with certain types
  • See full diff in compare view


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