uclahs-cds / pipeline-recalibrate-BAM

Nextflow pipeline to perform Indel Realignment and Base Quality Score Recalibration
https://uclahs-cds.github.io/pipeline-recalibrate-BAM/
GNU General Public License v2.0
1 stars 1 forks source link

Bump external/pipeline-Nextflow-config from `1960eaa` to `da8e990` #50

Closed dependabot[bot] closed 9 months ago

dependabot[bot] commented 10 months ago

Bumps external/pipeline-Nextflow-config from 1960eaa to da8e990.

Commits
  • da8e990 Merge pull request #55 from uclahs-cds/sfitz-add-sanitize-string
  • f87a762 add usage example to readme
  • 95ac0a9 change name to sanitize_uclahs_cds_id
  • 7e10f2c Merge pull request #58 from uclahs-cds/czhu-fix-retry
  • d52be4b Update CHANGELOG.md
  • bce4f07 changelog updated
  • 4d25ea7 Fix retry to force proc_name_set as a local variable
  • 405e333 update readme and changelog
  • a6b2c75 add sanitize_string function
  • See full diff in compare view


Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options
You can trigger Dependabot actions by commenting on this PR: - `@dependabot rebase` will rebase this PR - `@dependabot recreate` will recreate this PR, overwriting any edits that have been made to it - `@dependabot merge` will merge this PR after your CI passes on it - `@dependabot squash and merge` will squash and merge this PR after your CI passes on it - `@dependabot cancel merge` will cancel a previously requested merge and block automerging - `@dependabot reopen` will reopen this PR if it is closed - `@dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually - `@dependabot show ignore conditions` will show all of the ignore conditions of the specified dependency - `@dependabot ignore this major version` will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this minor version` will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this dependency` will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)
dependabot[bot] commented 9 months ago

Superseded by #51.