search

uclahs-cds / project-method-AlgorithmEvaluation-BNCH-000082-SRCRNDSeed

GNU General Public License v2.0
1 stars 0 forks source link

Launch SomaticSniper + Battenberg + DPClust seeds [HNSC multi-region] #68

Open philsteinberg opened 1 year ago

philsteinberg commented 1 year ago

Patients with complete samples:

SomaticSniper input: /hot/project/disease/HeadNeckTumor/HNSC-000084-LNMEvolution/data/SNV/somaticsniper/recsnv/vcfs/ Battenberg input: /hot/project/disease/HeadNeckTumor/HNSC-000084-LNMEvolution/data/Battenberg/refit_dpnorm/

submission script (temporary): /hot/users/psteinberg/work-code/mr_somaticsniper_battenberg_dpclust_submission_script.sh

logs: /hot/project/method/AlgorithmEvaluation/BNCH-000082-SRCRNDSeed/pipeline-call-src/run-somaticsniper-battenberg-dpclust/logs/