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uclahs-cds / project-method-AlgorithmEvaluation-BNCH-000082-SRCRNDSeed

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Launch Strelka2 + Battenberg + PyClone-VI seeds [HNSC single-region] #72

Closed philsteinberg closed 1 year ago

philsteinberg commented 1 year ago

Strelka2 input: /hot/project/disease/HeadNeckTumor/HNSC-000084-LNMEvolution/data/SNV/strelka2/recsnv/vcfs/ Battenberg input: /hot/project/disease/HeadNeckTumor/HNSC-000084-LNMEvolution/data/Battenberg/refit_dpnorm/

submission script (temporary): /hot/users/psteinberg/work-code/sr_strelka2_battenberg_pyclone-vi_submission_script.sh

output: /hot/project/method/AlgorithmEvaluation/BNCH-000082-SRCRNDSeed/pipeline-call-src/run-strelka2-battenberg-pyclone-vi/output/call-SRC-1.0.0-rc.1

philsteinberg commented 1 year ago

completed