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ucscGenomeBrowser / kent

UCSC Genome Browser source tree. Stable branch: "beta".
http://genome.ucsc.edu/
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twoBitToFa: Can only handle version 0 of this file. This is version 1 #67

Closed AlisaGU closed 2 years ago

AlisaGU commented 2 years ago

Hi, Due to the large size of my genome, i had to create the 2 bit file by faToTwoBit -long. However, twoBitToFa crushed and showed that Can only handle version 0 of this file. This is version 1 I have replaced the old version (2020) by the latest, but it didn't work.

Do you know the reason?

Best regards

ucscbrianlee commented 2 years ago

Hi,

Thank you for using the UCSC Genome Browser and your question about using the faToTwoBit -long option for larger genomes and the reverse twoBitToFa command. Your question has been answered on the UCSC mailing-list: https://groups.google.com/a/soe.ucsc.edu/g/genome/c/iI-oubRg0YM/m/xo3xeiF6CAAJ

Please use the UCSC mailing-list for such questions, and follow-up questions, instead of our GitHub account.

We have two mailing lists, one which is a publicly archived list that can be searched for previous answers, send questions to that list at genome@soe.ucsc.edu. If your questions have sensitive information, you can instead use genome-www@soe.ucsc.edu, and our internal team will have a chance to respond, but the correspondence does not become part of the public list.

All the best,