There is a deprecation warning from numpy in network_colocalization.py script saying not to use np.matrix() if using python 3.10 and numpy 1.23.0
What I Did
make test
/Users/xxx/src/NetColoc/netcoloc/network_colocalization.py:281: PendingDeprecationWarning: the matrix subclass is not the recommended way to represent matrices or deal with linear algebra (see https://docs.scipy.org/doc/numpy/user/numpy-for-matlab-users.html). Please adjust your code to use regular ndarray.
sim_rank = np.matrix(sim_rank)
Description
There is a deprecation warning from numpy in network_colocalization.py script saying not to use
np.matrix()if using python 3.10 and numpy1.23.0What I Did