ucsd-cmi / qebil

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--force should be smart based on preparation type #9

Open antgonza opened 1 year ago

antgonza commented 1 year ago

Currently, when you force a download, it forces all preparations to be that specific data_type and it will be convenient if the force was per data-type. In specific, study PRJEB21933 (https://qiita.ucsd.edu/study/description/15239); has 2 preparation types: Amplicon and Metagenomic. If we force download as 16S both get assigned that data_type, while it should only apply to Amplicon.