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create tool to resubmit a subset of jobs from an existing already-run workflow #631

Closed GoogleCodeExporter closed 8 years ago

GoogleCodeExporter commented 8 years ago
use the pbsrun.log

Original issue reported on code.google.com by zack...@gmail.com on 10 Dec 2013 at 8:23

GoogleCodeExporter commented 8 years ago
I created a tool that can rerun a subset of jobs from a previously run workflow.

for example, suppose we want to rerun all bissnp jobs from a given flowcell 
that has long since completed.

/auto/uec-00/ramjan/devel/extractJobsFromPBSrunLog

Original comment by zack...@gmail.com on 18 Dec 2013 at 9:34

GoogleCodeExporter commented 8 years ago
Yes bissnp is definitely problematic.  I think it should be run by the
groups requiring it since it's so computationally expensive and slow

Original comment by cmnico...@gmail.com on 18 Dec 2013 at 9:48