Closed GoogleCodeExporter closed 8 years ago
ahh, i see it:
notice that the genome is on a separate line after the "=" . I should make my
submitWorkflow.pl check for this.
This is vi's fault though, for some reason it likes to throw in linebreaks. the
work around is to put vi into "paste mode" by typeing
:set paste
then doing your paste into the terminal.
#Sample: ESR-9 (Gruber Sequencing of Homo sapiens)
Sample.41.SampleID = SAN1706A32
Sample.41.Lane = 8
Sample.41.Input = ESR-9_AACCAG_L008_R1_001.fastq.gz
Sample.41.Workflow = rnaseqv2
Sample.41.Reference =
/home/uec-00/shared/production/genomes/encode_hg19_mf/male.hg19
Original comment by zack...@gmail.com
on 8 Jul 2014 at 4:40
Thanks! I COULD NOT get rid of those line breaks, really weird. Had to do
it by hand in vi. All is well now
Original comment by cmnico...@gmail.com
on 8 Jul 2014 at 4:17
Original comment by zack...@gmail.com
on 8 Jul 2014 at 11:34
Original issue reported on code.google.com by
cmnico...@gmail.com
on 8 Jul 2014 at 12:00