pjpegion
commented
4 years ago @panll That error looks like a python3 vs python2 issue. What version of python are you using?
Closed panll closed 4 years ago
pjpegion
commented
4 years ago @panll That error looks like a python3 vs python2 issue. What version of python are you using?
panll
commented
4 years ago i am using python2 @pjpegion
panll
commented
4 years ago python2.7.5
pjpegion
commented
4 years ago hmm, the times I saw a similar error was when I was using python3 when I need to use python2.
ligiabernardet
commented
4 years ago @uturuncoglu Any ideas?
uturuncoglu
commented
4 years ago @ligiabernardet I need to try on Cheyenne to see it is reproducible or not. If not, it could be hard for me to track down the issue and fix it without access to Hera. Let me try and I'll update you.
climbfuji
commented
4 years ago @ligiabernardet I need to try on Cheyenne to see it is reproducible or not. If not, it could be hard for me to track down the issue and fix it without access to Hera. Let me try and I'll update you.
hera is down today anyway
uturuncoglu
commented
4 years ago @climbfuji okay, thanks. it gives me time to test it.
uturuncoglu
commented
4 years ago @ligiabernardet @panll @pjpegion I could reproduce the problem and fix it. It was related with the minor problem in UFSATM CIME interface and not related with the Python version. It will be available in the next update of the app. First, i need to have a PR in CIME side.
panll
commented
4 years ago Thanks! @uturuncoglu
cime crashed for nemsio input on hera for the test of intel c768
hfe06:/scratch2/BMC/det/lpan/hera/test/mrw/08312020/intel_nemsio/ufs-mrweather-app/cime/scripts/ufs-mrweather-app-workflow.c768>./case.build Building case in directory /scratch2/BMC/det/lpan/hera/test/mrw/08312020/intel_nemsio/ufs-mrweather-app/cime/scripts/ufs-mrweather-app-workflow.c768 sharedlib_only is False model_only is False Generating component namelists as part of build Creating component namelists 2020-09-01 03:52:37 atm Calling /scratch2/BMC/det/lpan/hera/test/mrw/08312020/intel_nemsio/ufs-mrweather-app/src/model/FV3/cime/cime_config/buildnml Checking /scratch2/BMC/det/lpan/hera/test/mrw//ufs_inputdata/icfiles/202008/20200831 directory to find raw input files ... Found 'atm.input.ic.nemsio' in input directory CHGRES namelist option 'input_type' is set to gaussian CHGRES will use /scratch2/BMC/det/lpan/hera/test/mrw//ufs_inputdata/icfiles/202008/20200831/atm.input.ic.nemsio removing file /scratch2/BMC/det/lpan/hera/test/mrw/08312020/intel_nemsio/ufs-mrweather-app/cime/scripts/ufs-mrweather-app-workflow.c768/Buildconf/ufsatm.input_data_list Linking input namelist for ufsatm Using /scratch1/BMC/gmtb/software/NCEPLIBS-ufs-v1.1.0/intel-18.0.5.274/impi-2018.0.4/share/postxconfig-NT-GFS.txt for post-processing Using /scratch1/BMC/gmtb/software/NCEPLIBS-ufs-v1.1.0/intel-18.0.5.274/impi-2018.0.4/share/postxconfig-NT-GFS-F00.txt for post-processing Creating INPUT and RESTART directory Traceback (most recent call last): File "./case.build", line 165, in
_main_func(doc)
File "./case.build", line 160, in _main_func
use_old=use_old, ninja=ninja, dry_run=dry_run)
File "/scratch2/BMC/det/lpan/hera/test/mrw/08312020/intel_nemsio/ufs-mrweather-app/cime/scripts/Tools/../../scripts/lib/CIME/build.py", line 727, in case_build
return run_and_log_case_status(functor, cb, caseroot=caseroot)
File "/scratch2/BMC/det/lpan/hera/test/mrw/08312020/intel_nemsio/ufs-mrweather-app/cime/scripts/Tools/../../scripts/lib/CIME/utils.py", line 1768, in run_and_log_case_status
rv = func()
File "/scratch2/BMC/det/lpan/hera/test/mrw/08312020/intel_nemsio/ufs-mrweather-app/cime/scripts/Tools/../../scripts/lib/CIME/build.py", line 721, in
save_build_provenance, use_old, ninja, dry_run)
File "/scratch2/BMC/det/lpan/hera/test/mrw/08312020/intel_nemsio/ufs-mrweather-app/cime/scripts/Tools/../../scripts/lib/CIME/build.py", line 661, in _case_build_impl
model_only, buildlist)
File "/scratch2/BMC/det/lpan/hera/test/mrw/08312020/intel_nemsio/ufs-mrweather-app/cime/scripts/Tools/../../scripts/lib/CIME/build.py", line 326, in _build_checks
case.create_namelists()
File "/scratch2/BMC/det/lpan/hera/test/mrw/08312020/intel_nemsio/ufs-mrweather-app/cime/scripts/Tools/../../scripts/lib/CIME/case/preview_namelists.py", line 91, in create_namelists
(self, caseroot, compname), case=self)
File "/scratch2/BMC/det/lpan/hera/test/mrw/08312020/intel_nemsio/ufs-mrweather-app/cime/scripts/Tools/../../scripts/lib/CIME/utils.py", line 413, in run_sub_or_cmd
getattr(mod, subname)(*subargs)
File "/scratch2/BMC/det/lpan/hera/test/mrw/08312020/intel_nemsio/ufs-mrweather-app/src/model/FV3/cime/cime_config/buildnml", line 1291, in buildnml
_create_namelist_chgres(case, confdir, config, namelist_infile, nmlgen_chgres, nmlgen_chgres_def, nmlgen_input, namelist_user, input_type)
File "/scratch2/BMC/det/lpan/hera/test/mrw/08312020/intel_nemsio/ufs-mrweather-app/src/model/FV3/cime/cime_config/buildnml", line 860, in _create_namelist_chgres
nmlgen.set_value('atm_files_input_grid', 'atm.input.ic.nemsio')
File "/scratch2/BMC/det/lpan/hera/test/mrw/08312020/intel_nemsio/ufs-mrweather-app/cime/scripts/Tools/../../scripts/lib/CIME/nmlgen.py", line 247, in set_value
literals = self._to_namelist_literals(name, value)
File "/scratch2/BMC/det/lpan/hera/test/mrw/08312020/intel_nemsio/ufs-mrweather-app/cime/scripts/Tools/../../scripts/lib/CIME/nmlgen.py", line 205, in _to_namelist_literals
values[i] = self.quote_string(scalar)
TypeError: 'str' object does not support item assignment