Build fails

[edwardhartnett]

Description

Building of the package fails like this:

-- Enable OpenMP support for C/C++/Fortran compiler
-- Got CCPP TYPEDEFS from environment variable: ccpp_typedefs.mod;gfs_typedefs.mod;module_radsw_parameters.mod;machine.mod;module_radlw_parameters.mod;mo_cloud_optics.mod;mo_gas_concentrations.mod;mo_gas_optics_rrtmgp.mod;mo_optical_props.mod;mo_source_functions.mod
-- Got CCPP SCHEMES from environment variable: /home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFDL_parse_tracers.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/aer_cloud.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/aerclm_def.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/aerinterp.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/calpreciptype.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cldwat2m_micro.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cldmacro.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/date_def.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/funcphys.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gcycle.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gfs_phy_tracer_config.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gocart_tracer_config_stub.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/h2o_def.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/h2ointerp.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/iccn_def.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/iccninterp.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/iounitdef.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/machine.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mersenne_twister.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mfpbl.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/micro_mg_utils.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/micro_mg2_0.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/micro_mg3_0.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_bfmicrophysics.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/multi_gases.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_gfdl_cloud_microphys.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_nst_model.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_nst_parameters.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_nst_water_prop.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_mp_radar.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_mp_thompson.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_mp_thompson_make_number_concentrations.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_MP_FER_HIRES.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_bl_mynn.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_sf_mynn.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_SF_JSFC.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_BL_MYJPBL.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_sf_noahmp_glacier.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_sf_noahmplsm.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_ugwp_module.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/ugwp_driver_v0.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_ugwp_triggers.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_ugwp_initialize.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_ugwp_solvers.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_ugwp_utils.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_orowam2017.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_vert_lsatdis.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_vert_orodis.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_vert_wmsdis.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/namelist_soilveg.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mfpblt.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mfpbltq.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mfscu.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mfscuq.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/noahmp_tables.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/num_parthds.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/ozne_def.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/ozinterp.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/physcons.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/physparam.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radcons.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radiation_aerosols.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radiation_astronomy.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radiation_clouds.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radiation_gases.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radiation_surface.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radlw_datatb.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radlw_param.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radsw_datatb.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radsw_param.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/samfaerosols.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfcsub.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sflx.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/set_soilveg.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/surface_perturbation.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cu_gf_deep.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cu_gf_sh.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/tridi.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/wv_saturation.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_sf_ruclsm.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/namelist_soilveg_ruc.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/set_soilveg_ruc.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_soil_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rrtmgp/mo_gas_concentrations.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rrtmgp/mo_gas_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rrtmgp/mo_gas_optics_rrtmgp.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rrtmgp/mo_rrtmgp_constants.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rrtmgp/mo_rrtmgp_util_reorder.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rrtmgp/mo_rrtmgp_util_string.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rrtmgp/kernels/mo_gas_optics_kernels.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rrtmgp/kernels/mo_rrtmgp_util_reorder_kernels.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/mo_fluxes.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/mo_rte_util_array.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/mo_optical_props.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/mo_rte_kind.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/mo_rte_lw.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/mo_rte_sw.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/mo_source_functions.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/kernels/mo_fluxes_broadband_kernels.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/kernels/mo_optical_props_kernels.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/kernels/mo_rte_solver_kernels.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/extensions/mo_compute_bc.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/extensions/mo_fluxes_byband.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/extensions/mo_fluxes_byband_kernels.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/extensions/mo_fluxes_bygpoint.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/extensions/mo_heating_rates.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/extensions/mo_rrtmgp_clr_all_sky.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/extensions/cloud_optics/mo_cloud_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/extensions/cloud_optics/mo_cloud_sampling.F90;/home/ed/ufs-weather-model/FV3/gfsphysics/GFS_layer/GFS_typedefs.F90;/home/ed/ufs-weather-model/FV3/gfsphysics/CCPP_layer/CCPP_typedefs.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_DCNV_generic.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_GWD_generic.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_MP_generic.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_PBL_generic.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_SCNV_generic.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_debug.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_phys_time_vary.fv3.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rad_time_vary.fv3.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rrtmg_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rrtmg_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rrtmg_setup.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_stochastics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_suite_interstitial.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_surface_generic.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_surface_composites.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_surface_loop_control.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_time_vary_pre.fv3.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_ugwp.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_ugwp_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cnvc90.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cs_conv.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cs_conv_aw_adj.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cu_ntiedtke_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cu_ntiedtke.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cu_ntiedtke_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/dcyc2.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/drag_suite.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gcm_shoc.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/get_prs_fv3.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gfdl_cloud_microphys.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gfdl_fv_sat_adj.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gscond.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gwdc.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gwdps.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/h2ophys.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/samfdeepcnv.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/samfshalcnv.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sascnvn.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/shalcnv.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/maximum_hourly_diagnostics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/m_micro.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/m_micro_interstitial.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cu_gf_driver_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cu_gf_driver.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cu_gf_driver_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/moninedmf.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/moninedmf_hafs.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/moninshoc.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/satmedmfvdif.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/satmedmfvdifq.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/shinhongvdif.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/ysuvdif.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_MYNNPBL_wrapper.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_MYNNSFC_wrapper.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_MYNNrad_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_MYNNrad_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_MYJSFC_wrapper.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_MYJPBL_wrapper.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mp_thompson_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mp_thompson.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mp_thompson_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/ozphys.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/ozphys_2015.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/precpd.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radlw_main.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radsw_main.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rascnv.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rayleigh_damp.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmg_lw_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmg_lw_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmg_sw_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmg_sw_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_diag.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_diag_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_drv_ruc.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/lsm_ruc_sfc_sice_interstitial.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_cice.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_diff.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_drv.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_noahmp_drv.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_nst.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_ocean.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_sice.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mp_fer_hires.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_suite_init_finalize_test.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmg_lw_cloud_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmg_sw_cloud_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_aux.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_lw_gas_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_lw_cloud_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_sw_gas_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_sw_cloud_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_sw_aerosol_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_lw_rte.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_lw_cloud_sampling.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_sw_rte.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_sw_cloud_sampling.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_lw_aerosol_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rrtmgp_setup.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rrtmgp_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_lw_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rrtmgp_sw_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rrtmgp_lw_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rrtmgp_sw_post.F90
-- Got CCPP CAPS from environment variable: /home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_shinhong_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_shinhong_fast_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_shinhong_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_shinhong_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_shinhong_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_shinhong_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v16beta_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v16beta_fast_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v16beta_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v16beta_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v16beta_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v16beta_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_SAR_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_SAR_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_SAR_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_SAR_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_SAR_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plusras_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plusras_fast_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plusras_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plusras_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plusras_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plusras_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_satmedmf_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_satmedmf_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_satmedmf_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_satmedmf_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_satmedmf_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_cpld_rasmgshoc_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_cpld_rasmgshoc_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_cpld_rasmgshoc_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_cpld_rasmgshoc_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_cpld_rasmgshoc_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_gfdlmp_noahmp_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_gfdlmp_noahmp_fast_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_gfdlmp_noahmp_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_gfdlmp_noahmp_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_gfdlmp_noahmp_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_gfdlmp_noahmp_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15_fast_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_v0_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_v0_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_v0_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_v0_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_v0_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15_mynn_cap.F90;/home/ed/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ccpp_FV3_GFS_v15_gf_thompson_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15_gf_thompson_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_rasmgshoc_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_rasmgshoc_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_rasmgshoc_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_rasmgshoc_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_rasmgshoc_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_HAFS_ferhires_update_moist_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_HAFS_ferhires_update_moist_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_HAFS_ferhires_update_moist_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_HAFS_ferhires_update_moist_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_HAFS_ferhires_update_moist_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15p2_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15p2_fast_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15p2_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15p2_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15p2_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15p2_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plus_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plus_fast_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plus_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plus_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plus_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plus_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_sas_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_sas_fast_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_sas_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_sas_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_sas_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_sas_stochastics_cap.F90
Force 64 bits in CCPP_layer
-- Configuring done
CMake Error at CMakeLists.txt:234 (add_executable):
  Target "NEMS.exe" links to item "-Wl,-rpath,/home/ed/local/hpc-stack/lib
  -L/home/ed/local/hpc-stack/lib -lesmf -lrt -lstdc++ -ldl -lnetcdff -lnetcdf
  -lhdf5_hl -lhdf5 -lz -ldl -lm " which has leading or trailing whitespace.
  This is now an error according to policy CMP0004.

-- Generating done

To Reproduce:

What compilers/machines are you seeing this with? On vanilla ubuntu system. Created these env vars:

export COMPILER=gnu
export NEMSIO_INC=/home/ed/local/hpc-stack/include_4
export NEMSIO_LIB=/home/ed/local/hpc-stack/lib/libnemsio.a
export BACIO_LIB4=/home/ed/local/hpc-stack/lib/libbacio_4.a
export SP_LIBd=/home/ed/local/hpc-stack/lib/libsp_4.a
export W3EMC_LIBd=/home/ed/local/hpc-stack/lib/libw3emc_4.a
export W3NCO_LIBd=/home/ed/local/hpc-stack/lib/libw3nco_4.a
export NETCDF=/home/ed/local/hpc-stack/
export ESMFMKFILE=/home/ed/local/hpc-stack/lib/esmf.mk

THen I ran build.sh.

Additional context

N/A

Output

See above.

[junwang-noaa]

Not sure if you have specified make options. Please see documentation at:

https://ufs-weather-model.readthedocs.io/en/latest/BuildingAndRunning.html#building-the-weather-model

On Tue, Sep 7, 2021 at 5:37 AM Edward Hartnett @.***> wrote:

Description

Building of the package fails like this:

-- Enable OpenMP support for C/C++/Fortran compiler -- Got CCPP TYPEDEFS from environment variable: ccpp_typedefs.mod;gfs_typedefs.mod;module_radsw_parameters.mod;machine.mod;module_radlw_parameters.mod;mo_cloud_optics.mod;mo_gas_concentrations.mod;mo_gas_optics_rrtmgp.mod;mo_optical_props.mod;mo_source_functions.mod -- Got CCPP SCHEMES from environment variable: /home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFDL_parse_tracers.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/aer_cloud.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/aerclm_def.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/aerinterp.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/calpreciptype.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cldwat2m_micro.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cldmacro.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/date_def.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/funcphys.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gcycle.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gfs_phy_tracer_config.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gocart_tracer_config_stub.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/h2o_def.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/h2ointerp.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/iccn_def.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/iccninterp.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/iounitdef.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/machine.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mersenne_twister.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mfpbl.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/micro_mg_utils.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/micro_mg2_0.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/micro_mg3_0.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_bfmicrophysics.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/multi_gases.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_gfdl_cloud_microphys.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_nst_model.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_nst_parameters.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_nst_water_prop.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_mp_radar.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_mp_thompson.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_mp_thompson_make_number_concentrations.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_MP_FER_HIRES.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_bl_mynn.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_sf_mynn.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_SF_JSFC.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_BL_MYJPBL.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_sf_noahmp_glacier.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_sf_noahmplsm.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_ugwp_module.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/ugwp_driver_v0.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_ugwp_triggers.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_ugwp_initialize.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_ugwp_solvers.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_ugwp_utils.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_orowam2017.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_vert_lsatdis.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_vert_orodis.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_vert_wmsdis.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/namelist_soilveg.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mfpblt.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mfpbltq.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mfscu.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mfscuq.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/noahmp_tables.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/num_parthds.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/ozne_def.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/ozinterp.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/physcons.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/physparam.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radcons.f90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radiation_aerosols.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radiation_astronomy.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radiation_clouds.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radiation_gases.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radiation_surface.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radlw_datatb.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radlw_param.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radsw_datatb.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radsw_param.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/samfaerosols.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfcsub.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sflx.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/set_soilveg.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/surface_perturbation.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cu_gf_deep.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cu_gf_sh.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/tridi.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/wv_saturation.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_sf_ruclsm.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/namelist_soilveg_ruc.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/set_soilveg_ruc.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_soil_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rrtmgp/mo_gas_concentrations.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rrtmgp/mo_gas_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rrtmgp/mo_gas_optics_rrtmgp.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rrtmgp/mo_rrtmgp_constants.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rrtmgp/mo_rrtmgp_util_reorder.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rrtmgp/mo_rrtmgp_util_string.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rrtmgp/kernels/mo_gas_optics_kernels.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rrtmgp/kernels/mo_rrtmgp_util_reorder_kernels.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/mo_fluxes.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/mo_rte_util_array.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/mo_optical_props.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/mo_rte_kind.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/mo_rte_lw.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/mo_rte_sw.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/mo_source_functions.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/kernels/mo_fluxes_broadband_kernels.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/kernels/mo_optical_props_kernels.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/rte/kernels/mo_rte_solver_kernels.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/extensions/mo_compute_bc.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/extensions/mo_fluxes_byband.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/extensions/mo_fluxes_byband_kernels.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/extensions/mo_fluxes_bygpoint.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/extensions/mo_heating_rates.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/extensions/mo_rrtmgp_clr_all_sky.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/extensions/cloud_optics/mo_cloud_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rte-rrtmgp/extensions/cloud_optics/mo_cloud_sampling.F90;/home/ed/ufs-weather-model/FV3/gfsphysics/GFS_layer/GFS_typedefs.F90;/home/ed/ufs-weather-model/FV3/gfsphysics/CCPP_layer/CCPP_typedefs.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_DCNV_generic.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_GWD_generic.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_MP_generic.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_PBL_generic.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_SCNV_generic.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_debug.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_phys_time_vary.fv3.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rad_time_vary.fv3.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rrtmg_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rrtmg_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rrtmg_setup.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_stochastics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_suite_interstitial.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_surface_generic.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_surface_composites.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_surface_loop_control.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_time_vary_pre.fv3.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_ugwp.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cires_ugwp_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cnvc90.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cs_conv.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cs_conv_aw_adj.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cu_ntiedtke_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cu_ntiedtke.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cu_ntiedtke_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/dcyc2.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/drag_suite.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gcm_shoc.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/get_prs_fv3.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gfdl_cloud_microphys.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gfdl_fv_sat_adj.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gscond.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gwdc.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/gwdps.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/h2ophys.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/samfdeepcnv.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/samfshalcnv.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sascnvn.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/shalcnv.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/maximum_hourly_diagnostics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/m_micro.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/m_micro_interstitial.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cu_gf_driver_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cu_gf_driver.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/cu_gf_driver_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/moninedmf.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/moninedmf_hafs.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/moninshoc.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/satmedmfvdif.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/satmedmfvdifq.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/shinhongvdif.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/ysuvdif.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_MYNNPBL_wrapper.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_MYNNSFC_wrapper.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_MYNNrad_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_MYNNrad_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_MYJSFC_wrapper.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/module_MYJPBL_wrapper.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mp_thompson_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mp_thompson.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mp_thompson_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/ozphys.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/ozphys_2015.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/precpd.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radlw_main.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/radsw_main.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rascnv.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rayleigh_damp.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmg_lw_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmg_lw_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmg_sw_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmg_sw_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_diag.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_diag_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_drv_ruc.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/lsm_ruc_sfc_sice_interstitial.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_cice.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_diff.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_drv.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_noahmp_drv.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_nst.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_ocean.F;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/sfc_sice.f;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/mp_fer_hires.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_suite_init_finalize_test.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmg_lw_cloud_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmg_sw_cloud_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_aux.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_lw_gas_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_lw_cloud_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_sw_gas_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_sw_cloud_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_sw_aerosol_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_lw_rte.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_lw_cloud_sampling.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_sw_rte.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_sw_cloud_sampling.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_lw_aerosol_optics.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rrtmgp_setup.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rrtmgp_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/rrtmgp_lw_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rrtmgp_sw_pre.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rrtmgp_lw_post.F90;/home/ed/ufs-weather-model/FV3/ccpp/physics/physics/GFS_rrtmgp_sw_post.F90 -- Got CCPP CAPS from environment variable: /home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_shinhong_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_shinhong_fast_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_shinhong_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_shinhong_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_shinhong_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_shinhong_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v16beta_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v16beta_fast_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v16beta_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v16beta_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v16beta_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v16beta_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_SAR_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_SAR_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_SAR_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_SAR_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_SAR_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plusras_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plusras_fast_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plusras_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plusras_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plusras_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plusras_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_satmedmf_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_satmedmf_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_satmedmf_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_satmedmf_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_satmedmf_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_cpld_rasmgshoc_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_cpld_rasmgshoc_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_cpld_rasmgshoc_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_cpld_rasmgshoc_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_cpld_rasmgshoc_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_gfdlmp_noahmp_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_gfdlmp_noahmp_fast_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_gfdlmp_noahmp_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_gfdlmp_noahmp_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_gfdlmp_noahmp_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_gfdlmp_noahmp_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15_fast_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_v0_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_v0_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_v0_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_v0_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GSD_v0_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15_mynn_cap.F90;/home/ed/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ccpp_FV3_GFS_v15_gf_thompson_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15_gf_thompson_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_rasmgshoc_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_rasmgshoc_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_rasmgshoc_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_rasmgshoc_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_rasmgshoc_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_HAFS_ferhires_update_moist_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_HAFS_ferhires_update_moist_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_HAFS_ferhires_update_moist_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_HAFS_ferhires_update_moist_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_HAFS_ferhires_update_moist_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15p2_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15p2_fast_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15p2_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15p2_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15p2_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15p2_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plus_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plus_fast_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plus_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plus_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plus_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_v15plus_stochastics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_sas_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_sas_fast_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_sas_time_vary_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_sas_radiation_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_sas_physics_cap.F90;/home/ed/ufs-weather-model/build/FV3/ccpp/physics/ccpp_FV3_GFS_2017_sas_stochastics_cap.F90 Force 64 bits in CCPP_layer -- Configuring done CMake Error at CMakeLists.txt:234 (add_executable): Target "NEMS.exe" links to item "-Wl,-rpath,/home/ed/local/hpc-stack/lib -L/home/ed/local/hpc-stack/lib -lesmf -lrt -lstdc++ -ldl -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz -ldl -lm " which has leading or trailing whitespace. This is now an error according to policy CMP0004.

-- Generating done To Reproduce:

What compilers/machines are you seeing this with? On vanilla ubuntu system. Created these env vars:

export COMPILER=gnu export NEMSIO_INC=/home/ed/local/hpc-stack/include_4 export NEMSIO_LIB=/home/ed/local/hpc-stack/lib/libnemsio.a export BACIO_LIB4=/home/ed/local/hpc-stack/lib/libbacio_4.a export SP_LIBd=/home/ed/local/hpc-stack/lib/libsp_4.a export W3EMC_LIBd=/home/ed/local/hpc-stack/lib/libw3emc_4.a export W3NCO_LIBd=/home/ed/local/hpc-stack/lib/libw3nco_4.a export NETCDF=/home/ed/local/hpc-stack/ export ESMFMKFILE=/home/ed/local/hpc-stack/lib/esmf.mk

THen I ran build.sh. Additional context

N/A Output

See above.

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[edwardhartnett]

OK, currently I am trying this:

export COMPILER=gnu
export NEMSIO_INC=/home/ed/local/s2/include_4
export NEMSIO_LIB=/home/ed/local/s2/lib/libnemsio.a
export BACIO_LIB4=/home/ed/local/s2/lib/libbacio_4.a
export SP_LIBd=/home/ed/local/s2/lib/libsp_4.a
export W3EMC_LIBd=/home/ed/local/s2/lib/libw3emc_4.a
export W3NCO_LIBd=/home/ed/local/s2/lib/libw3nco_4.a
export NETCDF=/home/ed/local/s2/
export ESMFMKFILE=/home/ed/local/s2/lib/esmf.mk
export CMAKE_FLAGS="-DAPP=ATM -DCCPP_SUITES=FV3_GFS_v16"

I am using the latest hpc-stack and the develop branch of ufs-weather-model and it's submodules. It is failing like this:

-- Found NetCDF: /home/ed/local/s2/include (found version "4.7.4") found components: C Fortran 
-- FindNetCDF defines targets:
--   - NetCDF_VERSION [4.7.4]
--   - NetCDF_PARALLEL [TRUE]
--   - NetCDF_C_CONFIG_EXECUTABLE [/home/ed/local/s2/bin/nc-config]
--   - NetCDF::NetCDF_C [SHARED] [Root: /home/ed/local/s2] Lib: /home/ed/local/s2/lib/libnetcdf.so 
--   - NetCDF_Fortran_CONFIG_EXECUTABLE [/home/ed/local/s2/bin/nf-config]
--   - NetCDF::NetCDF_Fortran [SHARED] [Root: /home/ed/local/s2] Lib: /home/ed/local/s2/lib/libnetcdff.so 
-- Found ESMF library: /home/ed/local/s2/lib/libesmf.a
CMake Error at CMakeLists.txt:115 (find_package):
  By not providing "FindFMS.cmake" in CMAKE_MODULE_PATH this project has
  asked CMake to find a package configuration file provided by "FMS", but
  CMake did not find one.

  Could not find a package configuration file provided by "FMS" with any of
  the following names:

    FMSConfig.cmake
    fms-config.cmake

  Add the installation prefix of "FMS" to CMAKE_PREFIX_PATH or set "FMS_DIR"
  to a directory containing one of the above files.  If "FMS" provides a
  separate development package or SDK, be sure it has been installed.

-- Configuring incomplete, errors occurred!
See also "/home/ed/ufs-weather-model/build/CMakeFiles/CMakeOutput.log".

@kgerheiser any idea what is going wrong here?

[junwang-noaa]

I think you need to set paths for FMS module and library

On Fri, Sep 10, 2021 at 7:21 AM Edward Hartnett @.***> wrote:

OK, currently I am trying this:

export COMPILER=gnu export NEMSIO_INC=/home/ed/local/s2/include_4 export NEMSIO_LIB=/home/ed/local/s2/lib/libnemsio.a export BACIO_LIB4=/home/ed/local/s2/lib/libbacio_4.a export SP_LIBd=/home/ed/local/s2/lib/libsp_4.a export W3EMC_LIBd=/home/ed/local/s2/lib/libw3emc_4.a export W3NCO_LIBd=/home/ed/local/s2/lib/libw3nco_4.a export NETCDF=/home/ed/local/s2/ export ESMFMKFILE=/home/ed/local/s2/lib/esmf.mk export CMAKE_FLAGS="-DAPP=ATM -DCCPP_SUITES=FV3_GFS_v16"

I am using the latest hpc-stack and the develop branch of ufs-weather-model and it's submodules. It is failing like this:

-- Found NetCDF: /home/ed/local/s2/include (found version "4.7.4") found components: C Fortran -- FindNetCDF defines targets: -- - NetCDF_VERSION [4.7.4] -- - NetCDF_PARALLEL [TRUE] -- - NetCDF_C_CONFIG_EXECUTABLE [/home/ed/local/s2/bin/nc-config] -- - NetCDF::NetCDF_C [SHARED] [Root: /home/ed/local/s2] Lib: /home/ed/local/s2/lib/libnetcdf.so -- - NetCDF_Fortran_CONFIG_EXECUTABLE [/home/ed/local/s2/bin/nf-config] -- - NetCDF::NetCDF_Fortran [SHARED] [Root: /home/ed/local/s2] Lib: /home/ed/local/s2/lib/libnetcdff.so -- Found ESMF library: /home/ed/local/s2/lib/libesmf.a CMake Error at CMakeLists.txt:115 (find_package): By not providing "FindFMS.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "FMS", but CMake did not find one.

Could not find a package configuration file provided by "FMS" with any of the following names:

FMSConfig.cmake
fms-config.cmake

Add the installation prefix of "FMS" to CMAKE_PREFIX_PATH or set "FMS_DIR" to a directory containing one of the above files. If "FMS" provides a separate development package or SDK, be sure it has been installed.

-- Configuring incomplete, errors occurred! See also "/home/ed/ufs-weather-model/build/CMakeFiles/CMakeOutput.log".

@kgerheiser https://github.com/kgerheiser any idea what is going wrong here?

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[kgerheiser]

CMake is searching for <prefix>/lib/cmake/fms/fms-config*, but not finding it. Do you have <prefix> in your CMAKE_PREFIX_PATH or (FMS_ROOT, FMS_DIR, etc).

[edwardhartnett]

Yes, I added the hpc-stack install directory to CMAKE_PREFIX_PATH, and it worked! ;-) I will close this ticket.

[edwardhartnett]

BTW I tried to build the tagged ufs-v1.1.0 release and it fails like this:

-- Configuring done
CMake Error at CMakeLists.txt:180 (add_executable):
  Target "NEMS.exe" links to item "-Wl,-rpath,/home/ed/local/s3/lib
  -L/home/ed/local/s3/lib -lesmf -lrt -lstdc++ -ldl -lnetcdff -lnetcdf
  -lhdf5_hl -lhdf5 -lz -ldl -lm " which has leading or trailing whitespace.
  This is now an error according to policy CMP0004.

CMake Error at CMakeLists.txt:180 (add_executable):
  Target "NEMS.exe" links to item "-Wl,-rpath,/home/ed/local/s3/lib
  -L/home/ed/local/s3/lib -lesmf -lrt -lstdc++ -ldl -lnetcdff -lnetcdf
  -lhdf5_hl -lhdf5 -lz -ldl -lm " which has leading or trailing whitespace.
  This is now an error according to policy CMP0004.

CMake Error at CMakeLists.txt:180 (add_executable):
  Target "NEMS.exe" links to item "-Wl,-rpath,/home/ed/local/s3/lib
  -L/home/ed/local/s3/lib -lesmf -lrt -lstdc++ -ldl -lnetcdff -lnetcdf
  -lhdf5_hl -lhdf5 -lz -ldl -lm " which has leading or trailing whitespace.
  This is now an error according to policy CMP0004.

[edwardhartnett]

Well, it worked once, but not again. ;-(

Here's what I am using:

export COMPILER=gnu
export NEMSIO_INC=/home/ed/local/s3/include_4
export NEMSIO_LIB=/home/ed/local/s3/lib/libnemsio.a
export BACIO_LIB4=/home/ed/local/s3/lib/libbacio_4.a
export SP_LIBd=/home/ed/local/s3/lib/libsp_4.a
export W3EMC_LIBd=/home/ed/local/s3/lib/libw3emc_4.a
export W3NCO_LIBd=/home/ed/local/s3/lib/libw3nco_4.a
export NETCDF=/home/ed/local/s3/
export ESMFMKFILE=/home/ed/local/s3/lib/esmf.mk
export CMAKE_FLAGS="-DAPP=ATM -DCCPP_SUITES=FV3_GFS_v16 -DCMAKE_PREFIX_PATH=/home/ed/local/s3/"

Here's how it fails:

[100%] Linking Fortran executable ufs_model
/usr/bin/ld: /home/ed/local/s3/lib/libupp.a(PROCESS.f.o): in function `process_':
/home/ed/hpc-stack/pkg/upp-upp_v10.0.5/sorc/ncep_post.fd/PROCESS.f:81: undefined reference to `timef_'
/usr/bin/ld: /home/ed/hpc-stack/pkg/upp-upp_v10.0.5/sorc/ncep_post.fd/PROCESS.f:83: undefined reference to `timef_'
/usr/bin/ld: /home/ed/hpc-stack/pkg/upp-upp_v10.0.5/sorc/ncep_post.fd/PROCESS.f:86: undefined reference to `timef_'
/usr/bin/ld: /home/ed/hpc-stack/pkg/upp-upp_v10.0.5/sorc/ncep_post.fd/PROCESS.f:88: undefined reference to `timef_'
/usr/bin/ld: /home/ed/hpc-stack/pkg/upp-upp_v10.0.5/sorc/ncep_post.fd/PROCESS.f:91: undefined reference to `timef_'
/usr/bin/ld: /home/ed/local/s3/lib/libupp.a(PROCESS.f.o):/home/ed/hpc-stack/pkg/upp-upp_v10.0.5/sorc/ncep_post.fd/PROCESS.f:94: more undefined references to `timef_' follow
collect2: error: ld returned 1 exit status
make[2]: *** [CMakeFiles/ufs_model.dir/build.make:122: ufs_model] Error 1
make[1]: *** [CMakeFiles/Makefile2:213: CMakeFiles/ufs_model.dir/all] Error 2
make: *** [Makefile:156: all] Error 2
(base) ed@mikado:~/ufs-weather-model$ 

[arunchawla-NOAA]

@edwardhartnett is the ufs-weather-model build still failing for you ? Or can this issue be closed ?