Open cramg opened 3 years ago
Hayes and Archontis exposed, in a careful way, how MM-GB(PB)SA calculations of Protein-Ligand are made. They decompose every equations involved and explain each of its component.
I consider it relevant to have a conversation about the equations shown in order to make them clear.
Of course, let's schedule a meeting. [Following this in slack]
Hayes, Joseph M., and Georgios Archontis. "MM-GB (PB) SA calculations of protein-ligand binding free energies." Molecular Dynamics-Studies of Synthetic and Biological Macromolecules (2012): 171-190