Hi, I was trying to merge two assembly results, came from different assemblers.
I could run through pilon and it seems like it has processed through MUMMer.
However, NucDiff/results directory is empty.
I've checked the log file, but I could not figure out what was the problem.
$ ls -hal
total 114M
163 Mar 23 01:39 .
191 Mar 22 14:48 ..
38M Mar 23 01:39 nucmerge.coords
37M Mar 23 01:39 nucmerge.delta
17M Mar 23 01:39 nucmerge.filter
0 Mar 23 01:39 nucmerge_filtered.snps
0 Mar 23 01:29 results
Hi, I was trying to merge two assembly results, came from different assemblers. I could run through pilon and it seems like it has processed through MUMMer. However, NucDiff/results directory is empty. I've checked the log file, but I could not figure out what was the problem.
$ ls -hal total 114M 163 Mar 23 01:39 . 191 Mar 22 14:48 .. 38M Mar 23 01:39 nucmerge.coords 37M Mar 23 01:39 nucmerge.delta 17M Mar 23 01:39 nucmerge.filter 0 Mar 23 01:39 nucmerge_filtered.snps 0 Mar 23 01:29 results
partial_run.log