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uio-cels / NucDiff

In-depth characterization and annotation of differences between two sets of DNA sequences
Mozilla Public License 2.0
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nucdiff error #24

Open rthapa1 opened 3 years ago

rthapa1 commented 3 years ago

Hi, I am running NucDiff but got an error. Could you please check this? Thanks

File "/Users/Downloads/nucdiff/NucDiff-master/nucdiff/nucdiff.py", line 17, in from .find_errors import FIND_ERRORS_ASSEMBLY ModuleNotFoundError: No module named 'main.find_errors'; 'main' is not a package

kseniakh commented 3 years ago

Hi!

Can you write the command that you try to run?

rthapa1 commented 3 years ago

python /Users/Downloads/nucdiff/NucDiff-master/nucdiff/nucdiff.py WA1 /Users/Downloads/nucdiff/GCF_000091565.fasta /Users/Downloads/nucdiff/barcode2_EaWA1.fasta

kseniakh commented 3 years ago

Please try these commands: cd /Users/Downloads/nucdiff/NucDiff-master/ python -m nucdiff.nucdiff WA1 /Users/Downloads/nucdiff/GCF_000091565.fasta /Users/Downloads/nucdiff/barcode2_EaWA1.fasta