mbrzus commented 4 months ago

Overview

This PR introduces first functional kubernetes subsystem. It will be expanded towards full system implementation using kubernetes and can be utilized for prototyping EKS deployement.

Implementation

The detailed description of components and implementation is in the wiki page.

Testing

Performed detailed manual testing.

Notes

It is crucial to set up correct permissions for the Kubernetes API while manipulating multiple jobs. Additionally it is monumental to ensure the correct mounting paths and to understand how the components connect with each other to create the subsystem.

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github-actions[bot] commented 4 months ago

Jest Coverage

Summary

Lines	Statements	Branches	Functions
	73.25% (515/703)	56.8% (96/169)	66.05% (144/218)

Junit Summary

Tests	Skipped	Failures	Errors	Time
37	0 :zzz:	0 :x:	0 :fire:	3.98s :stopwatch:

Coverage Report (72%)

File	% Stmts	% Branch	% Funcs	% Lines	Uncovered Line #s
All files	73.25	56.8	66.05	72.04
fixtures	100	100	100	100
hospitalFixture.tsx	100	100	100	100
kidneyStudyFixture.tsx	100	100	100	100
providerFixture.tsx	100	100	100	100
src/components	90.99	44.44	89.65	91.17
ErrorMessageBox.tsx	100	100	100	100
EventTimeline.tsx	71.42	0	0	75	79–83
Metadata.tsx	85.71	0	80	84.61	74–75
Navbar.tsx	90.47	50	100	90	150, 163
StackedChart.tsx	100	66.66	100	100	72–85
withAuthenticated.tsx	100	100	100	100
src/contexts	90	100	58.33	89.28
authContext.tsx	90	100	58.33	89.28	72, 90, 104
src/data	30.93	15.38	33.87	20
index.ts	30.93	15.38	33.87	20	17–27, 38–48, 59–69, 80–90, 98–108, 118–128, 140–149, 161–171, 181–190, 200–205, 217–240, 251–259, 269–274, 287–326, 335–345, 355–365, 370–380, 385–395, 411–412
src/hooks	100	100	100	100
useAuthContext.ts	100	100	100	100
src/pages	81.72	67.27	80.39	82.01
analytics.tsx	96.15	100	88.88	96	90
dashboard.tsx	100	100	100	100
index.tsx	100	100	100	100
login.tsx	83.87	88.88	85.71	83.33	52–57, 109
profile.tsx	77.5	61.53	80	80.55	59–61, 83–86
signup.tsx	71.62	55.55	66.66	71.23	89–91, 98–100, 116–140, 224–231, 270–287
src/pages/apikeys	73.21	54.54	64.28	71.69
index.tsx	73.21	54.54	64.28	71.69	74–77, 89, 94–99, 104–108, 195
src/pages/studies	79.56	57.14	74.35	81.74
[id].tsx	69.01	37.5	57.89	71.87	85, 94–108, 112–114, 125–126, 130, 134, 143, 219
index.tsx	90.9	71.87	90	91.93	49, 64, 141, 150, 157