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ulelab / peka

Find motifs enriched around prominent crosslinks
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Fix clustering and add example results #9

Closed kkuret closed 2 years ago

kkuret commented 2 years ago

CLUSTERING

  1. Fixed a bug that affected the selection of optimized clustering parameters for top n k-mers and caused the maximal number of allowed clusters to be ignored (final n clusters was set automatically by Affinity propagation).
  2. Speed up clustering, by reducing the amount of covered parameter space.
  3. Removed unreferenced variables

ADDING EXAMPLE RESULTS: Added the example results that are obtained by running PEKA as indicated in peka_run.sh