Improve pedigree simplification

ultimatesource / denovogear

A program to detect denovo-variants using next-generation sequencing data.

GNU General Public License v3.0

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Open reedacartwright opened 6 years ago

reedacartwright commented 6 years ago

Pedigrees are currently simplified to remove uninformative nodes. However, some nodes are not removed that can be.

[ ] Two founders (without somatic data) that are only connected to a child, can be removed and the child made a founder.
[ ] A zero-length branch can be removed: ((A,B):0,D) -> (A,B,D)