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ultimatesource / denovogear

A program to detect denovo-variants using next-generation sequencing data.
http://www.nature.com/nmeth/journal/v10/n10/full/nmeth.2611.html
GNU General Public License v3.0
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Fix memory leak and undefined value assignment #295

Closed jgarciamesa closed 5 years ago

jgarciamesa commented 5 years ago

In order to fix issue #288 this fixes:

codecov[bot] commented 5 years ago

Codecov Report

Merging #295 into develop will decrease coverage by 0.57%. The diff coverage is 80%.

Impacted file tree graph

@@             Coverage Diff             @@
##           develop     #295      +/-   ##
===========================================
- Coverage    83.96%   83.39%   -0.58%     
===========================================
  Files           65       65              
  Lines         5838     5793      -45     
===========================================
- Hits          4902     4831      -71     
- Misses         936      962      +26
Impacted Files Coverage Δ
src/dnm/bcf2Qcall.cc 94.06% <100%> (+0.05%) :arrow_up:
src/lib/call_mutations.cc 94.3% <100%> (ø) :arrow_up:
src/dnm/bcf2Paired.cc 89.23% <50%> (+0.16%) :arrow_up:
src/dnm/parser.h 0% <0%> (-90%) :arrow_down:
src/include/dng/io/bcf.h 83.18% <0%> (-3.54%) :arrow_down:
src/include/dng/pedigree.h 98.3% <0%> (-1.7%) :arrow_down:
src/include/dng/hts/bam.h 86.58% <0%> (-1.22%) :arrow_down:
src/include/dng/io/bam.h 97.14% <0%> (-0.72%) :arrow_down:
src/include/dng/utility.h 98.83% <0%> (-0.1%) :arrow_down:
src/include/dng/peeling.h 100% <0%> (ø) :arrow_up:
... and 2 more

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