Run in dev on SBJ04364 (wfr.85e80bcc8c7745888f62a2c21be3a1ad/trn.f1423bf3f85b4d8283f70c670443ee89) with PAAD reference:
Quitting from lines 2946-3078 [cn_genomic_view] (rnasum.Rmd)
Error in `dplyr::mutate()`:
ℹ In argument: `rnasum_rmd = RNAsum::rnasum_rmd(...)`.
ℹ In row 1.
Caused by error in `manhattanly::manhattanr()`:
! gene argument specified as Diff_Z_score but this column not found in 'x' data.frame
Backtrace:
1. manhattanly::manhattanr(...)
Also reproduced locally. Might have something to do with the PAAD columns getting mixed.
Run in dev on SBJ04364 (
wfr.85e80bcc8c7745888f62a2c21be3a1ad
/trn.f1423bf3f85b4d8283f70c670443ee89
) with PAAD reference:Also reproduced locally. Might have something to do with the PAAD columns getting mixed.