umccr / RNAsum

Pipeline for generating RNAseq-based cancer patient reports
https://umccr.github.io/RNAsum/
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Update test data-2 #82

Closed skanwal closed 1 year ago

skanwal commented 1 year ago

Further update to https://github.com/umccr/RNAsum/pull/81, adding salmon's gene quantification output as we first check and give preference to this output.

We can also reduce size of quant outputs if needed.