That output file is around 400 MB unzipped, down to 45 MB if zipped (based on N=1 test). Around a million+ rows, since you've got Lane Tile Cycle.
Runtime is around 5 minutes.
It includes various metrics which are used to generate plots like those found in the SAV imaging tab which is used by the wet lab team. Example:
Hello, I was wondering if it's possible to add
imaging_table
to the interop commands at https://github.com/umccr/cwl-ica/blob/main/tools/illumina-interop/1.3.1/illumina-interop__1.3.1.cwl#L50 ? See https://illumina.github.io/interop/imaging_table.html.That output file is around 400 MB unzipped, down to 45 MB if zipped (based on N=1 test). Around a million+ rows, since you've got Lane Tile Cycle. Runtime is around 5 minutes.
It includes various metrics which are used to generate plots like those found in the SAV imaging tab which is used by the wet lab team. Example:
For instance, we can get this plot of
% Occupied
vs.% Pass Filter
:cc. @mhlunimelb