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umccr / cwl-ica

A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide
MIT License
8 stars 2 forks source link

Enhancement/improve ora pipeline #563

Closed alexiswl closed 2 months ago

alexiswl commented 2 months ago

Run fastq gz md5 simultaneously with dragen ora and rsync of non-fastq files.

Added print-file-info and check-integrity steps.