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nextflow-stack
AWS stack to run Nextflow pipelines on Batch using shared resources
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Disable FusionFS for sash
#58
Closed
scwatts
closed
1 year ago
scwatts
commented
1 year ago
Bump to sash v0.1.9
Includes bolt v0.1.6, which removes partial workaround for FusionFS and PCGR/vcfanno
New Docker images for non-FusionFS configuration (all include extra layer with AWS CLIv2)
Adds
fusionFs
stack setting
Controls container volumes and mount points in Batch job definition
Update sash Nextflow configuration to disable FusionFS and Wave
Set scratch directory as local NVMe SSD to avoid increasing EBS volume size
fusionFsstack setting