Pierian SNV subsetting - Githubissues

umccr / umccrise

:snake: DRAGEN Tumor/Normal workflow post-processing

https://umccr.github.io/umccrise/

MIT License

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Pierian SNV subsetting #113

Closed pdiakumis closed 2 years ago

pdiakumis commented 2 years ago

Solves #112. For now I'm committing the BED file of coding regions in the umccrise source, until we sort out the refdata rejig (thanks @mhlunimelb!). The filtration will only occur if there are more than 50K final SNVs.

pdiakumis commented 2 years ago

Gentle ping for the reviewers - want to include this change in the next, probably final, release (rottweiler milestone 🐶).