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umccr / umccrise

:snake: DRAGEN Tumor/Normal workflow post-processing
https://umccr.github.io/umccrise/
MIT License
21 stars 8 forks source link

Package `multiqc-1.10dev+umccrise_bcbio_aws.0.0.1-py_0` requires python >=3.6,3.9 #85

Closed pdiakumis closed 2 years ago

pdiakumis commented 2 years ago

Getting this when using the bcbio_v1.2.4 branch on Gadi:

Looking for: ['python==3.7.3', 'pip', 'git', 'cython', 'bcftools==1.10.2', "openssl[version='>=1.1']", 'bedtools==2.29.2', 'samtools==1.10', 'vcfanno==0.3.2', 'vcflib==1.0.1', 'bedops==2.4.39', 'mosdepth==0.2.9', 'pythonpy', 'click', 'cyvcf2==0.30.1', 'numpy==1.19.4', 'pandas==1.1.5', "curl[version='>=7.59']", 'snakemake-minimal', 'pyyaml==5.4.1', 'multiqc==1.10dev+umccrise_bcbio_aws.0.0.1', 'nose', 'pyensembl==1.9.0', 'break-point-inspector==1.5', 'tabix==0.2.6', 'goleft==0.2.4', 'parallel', 'pygraphviz==1.6', 'pygments==2.7.3', 'gsort==0.1.4', 'snpeff==4.3.1t', 'optitype==1.3.5', 'peddy==0.4.7', 'tsvtools==0.2.0', 'ngs_utils==2.8.10', 'versionpy==0.4.11', 'bed_annotation==1.1.6', 'natsort==7.1.0', 'igvtools==2.5.3', 'openjdk==11.0.8', 'vcf2maf==1.6.19', 'dvc==1.11.6', 'dvc-s3==1.11.6']

Encountered problems while solving:
  - package multiqc-1.10dev+umccrise_bcbio_aws.0.0.1-py_0 requires python >=3.6,3.9, but none of the providers can be installed

Updating to multiqc-1.10dev+umccrise_bcbio_aws.0.0.2-py_0 seems to solve this.

pdiakumis commented 2 years ago

Solved via #86