Add requirements to use stable version of MedCAT (1.1.13). The code to create biLSTM will be updated soon, so we have to do this again.
Small fixes in notebooks
Update biLSTM DCC predictions file
Interestingly, F1 score of identified negations dropped from 0.89 to 0.86. Also many examples in 03_test_examples.ipynb now show mistakes in negation detection. So this is not good for demo-ing...
When new version of MedCAT's biLSTM code will be released, I'll update this again, and then we can see if we want to tune the hyperparameters to optimize it for our task.
1.1.13). The code to create biLSTM will be updated soon, so we have to do this again.Interestingly, F1 score of identified negations dropped from 0.89 to 0.86. Also many examples in
03_test_examples.ipynbnow show mistakes in negation detection. So this is not good for demo-ing...When new version of MedCAT's biLSTM code will be released, I'll update this again, and then we can see if we want to tune the hyperparameters to optimize it for our task.