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uncomplicate / neanderthal

Fast Clojure Matrix Library
http://neanderthal.uncomplicate.org
Eclipse Public License 1.0
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running lein repl from command prompt works, but not inside IntelliJ Idea using Cursive #105

Closed erkkikeranen closed 3 years ago

erkkikeranen commented 3 years ago

Hi!

I didn't find any guidance while I tried to look, but if someone could help me out with my small problem.

I am using OS X, JDK 11, Intellij Idea and Cursive. My project.clj follows the principles of Hello World example (MKL in dependencies).

If I run lein repl from command prompt (and run it in a terminal window for example), everything is fine, but If I use a Clojure REPL as Run configuration in Idea, I get this error on startup:

#error {
 :cause /private/var/folders/77/xphzkbks23q0npyyrw8j739r0000gn/T/libneanderthal-mkl-0.33.016357903437272459458.jnilib: dlopen(/private/var/folders/77/xphzkbks23q0npyyrw8j739r0000gn/T/libneanderthal-mkl-0.33.016357903437272459458.jnilib, 1): Library not loaded: @rpath/libmkl_intel_lp64.dylib
  Referenced from: /private/var/folders/77/xphzkbks23q0npyyrw8j739r0000gn/T/libneanderthal-mkl-0.33.016357903437272459458.jnilib
  Reason: image not found
 :via
 [{:type clojure.lang.Compiler$CompilerException
   :message Syntax error macroexpanding at (mkl.clj:90:35).
   :data #:clojure.error{:phase :execution, :line 90, :column 35, :source mkl.clj}
   :at [clojure.lang.Compiler$InvokeExpr eval Compiler.java 3707]}
  {:type java.lang.UnsatisfiedLinkError
   :message /private/var/folders/77/xphzkbks23q0npyyrw8j739r0000gn/T/libneanderthal-mkl-0.33.016357903437272459458.jnilib: dlopen(/private/var/folders/77/xphzkbks23q0npyyrw8j739r0000gn/T/libneanderthal-mkl-0.33.016357903437272459458.jnilib, 1): Library not loaded: @rpath/libmkl_intel_lp64.dylib
  Referenced from: /private/var/folders/77/xphzkbks23q0npyyrw8j739r0000gn/T/libneanderthal-mkl-0.33.016357903437272459458.jnilib
  Reason: image not found
   :at [java.lang.ClassLoader$NativeLibrary load0 ClassLoader.java -2]}]
 :trace
 [[java.lang.ClassLoader$NativeLibrary load0 ClassLoader.java -2]
  [java.lang.ClassLoader$NativeLibrary load ClassLoader.java 2442]
  [java.lang.ClassLoader$NativeLibrary loadLibrary ClassLoader.java 2498]
  [java.lang.ClassLoader loadLibrary0 ClassLoader.java 2694]
  [java.lang.ClassLoader loadLibrary ClassLoader.java 2627]
  [java.lang.Runtime load0 Runtime.java 768]
  [java.lang.System load System.java 1837]
  [uncomplicate.neanderthal.internal.host.NarSystem loadLibrary NarSystem.java 48]
  [uncomplicate.neanderthal.internal.host.MKL <clinit> MKL.java 16]
  [uncomplicate.neanderthal.internal.host.mkl$create_stream_ars5 invokeStatic mkl.clj 87]
  [uncomplicate.neanderthal.internal.host.mkl$create_stream_ars5 invoke mkl.clj 85]
  [clojure.lang.AFn applyToHelper AFn.java 154]
  [clojure.lang.AFn applyTo AFn.java 144]
  [clojure.lang.Compiler$InvokeExpr eval Compiler.java 3702]
  [clojure.lang.Compiler$DefExpr eval Compiler.java 457]
  [clojure.lang.Compiler eval Compiler.java 7182]
  [clojure.lang.Compiler load Compiler.java 7636]
  [clojure.lang.RT loadResourceScript RT.java 381]
  [clojure.lang.RT loadResourceScript RT.java 372]
  [clojure.lang.RT load RT.java 459]
  [clojure.lang.RT load RT.java 424]
  [clojure.core$load$fn__6839 invoke core.clj 6126]
  [clojure.core$load invokeStatic core.clj 6125]
  [clojure.core$load doInvoke core.clj 6109]
  [clojure.lang.RestFn invoke RestFn.java 408]
  [clojure.core$load_one invokeStatic core.clj 5908]
  [clojure.core$load_one invoke core.clj 5903]
  [clojure.core$load_lib$fn__6780 invoke core.clj 5948]
  [clojure.core$load_lib invokeStatic core.clj 5947]
  [clojure.core$load_lib doInvoke core.clj 5928]
  [clojure.lang.RestFn applyTo RestFn.java 142]
  [clojure.core$apply invokeStatic core.clj 667]
  [clojure.core$load_libs invokeStatic core.clj 5989]
  [clojure.core$load_libs doInvoke core.clj 5969]
  [clojure.lang.RestFn applyTo RestFn.java 137]
  [clojure.core$apply invokeStatic core.clj 667]
  [clojure.core$require invokeStatic core.clj 6007]
  [clojure.core$require doInvoke core.clj 6007]
  [clojure.lang.RestFn invoke RestFn.java 436]
  [uncomplicate.neanderthal.native$eval25924$loading__6721__auto____25925 invoke native.clj 9]
  [uncomplicate.neanderthal.native$eval25924 invokeStatic native.clj 9]
  [uncomplicate.neanderthal.native$eval25924 invoke native.clj 9]
  [clojure.lang.Compiler eval Compiler.java 7177]
  [clojure.lang.Compiler eval Compiler.java 7166]
  [clojure.lang.Compiler load Compiler.java 7636]
  [clojure.lang.RT loadResourceScript RT.java 381]
  [clojure.lang.RT loadResourceScript RT.java 372]
  [clojure.lang.RT load RT.java 459]
  [clojure.lang.RT load RT.java 424]
  [clojure.core$load$fn__6839 invoke core.clj 6126]
  [clojure.core$load invokeStatic core.clj 6125]
  [clojure.core$load doInvoke core.clj 6109]
  [clojure.lang.RestFn invoke RestFn.java 408]
  [clojure.core$load_one invokeStatic core.clj 5908]
  [clojure.core$load_one invoke core.clj 5903]
  [clojure.core$load_lib$fn__6780 invoke core.clj 5948]
  [clojure.core$load_lib invokeStatic core.clj 5947]
  [clojure.core$load_lib doInvoke core.clj 5928]
  [clojure.lang.RestFn applyTo RestFn.java 142]
  [clojure.core$apply invokeStatic core.clj 667]
  [clojure.core$load_libs invokeStatic core.clj 5985]
  [clojure.core$load_libs doInvoke core.clj 5969]
  [clojure.lang.RestFn applyTo RestFn.java 137]
  [clojure.core$apply invokeStatic core.clj 667]
  [clojure.core$require invokeStatic core.clj 6007]
  [clojure.core$require doInvoke core.clj 6007]
  [clojure.lang.RestFn invoke RestFn.java 703]
  [cljml.user$eval149$loading__6721__auto____150 invoke user.clj 1]
  [cljml.user$eval149 invokeStatic user.clj 1]
  [cljml.user$eval149 invoke user.clj 1]
  [clojure.lang.Compiler eval Compiler.java 7177]
  [clojure.lang.Compiler eval Compiler.java 7166]
  [clojure.lang.Compiler load Compiler.java 7636]
  [clojure.lang.RT loadResourceScript RT.java 381]
  [clojure.lang.RT loadResourceScript RT.java 372]
  [clojure.lang.RT load RT.java 459]
  [clojure.lang.RT load RT.java 424]
  [clojure.core$load$fn__6839 invoke core.clj 6126]
  [clojure.core$load invokeStatic core.clj 6125]
  [clojure.core$load doInvoke core.clj 6109]
  [clojure.lang.RestFn invoke RestFn.java 408]
  [clojure.core$load_one invokeStatic core.clj 5908]
  [clojure.core$load_one invoke core.clj 5903]
  [clojure.core$load_lib$fn__6780 invoke core.clj 5948]
  [clojure.core$load_lib invokeStatic core.clj 5947]
  [clojure.core$load_lib doInvoke core.clj 5928]
  [clojure.lang.RestFn applyTo RestFn.java 142]
  [clojure.core$apply invokeStatic core.clj 667]
  [clojure.core$load_libs invokeStatic core.clj 5985]
  [clojure.core$load_libs doInvoke core.clj 5969]
  [clojure.lang.RestFn applyTo RestFn.java 137]
  [clojure.core$apply invokeStatic core.clj 667]
  [clojure.core$require invokeStatic core.clj 6007]
  [clojure.core$require doInvoke core.clj 6007]
  [clojure.lang.RestFn invoke RestFn.java 408]
  [user$eval5 invokeStatic form-init7761340839661235193.clj 1]
  [user$eval5 invoke form-init7761340839661235193.clj 1]
  [clojure.lang.Compiler eval Compiler.java 7177]
  [clojure.lang.Compiler eval Compiler.java 7166]
  [clojure.lang.Compiler eval Compiler.java 7166]
  [clojure.lang.Compiler load Compiler.java 7636]
  [clojure.lang.Compiler loadFile Compiler.java 7574]
  [clojure.main$load_script invokeStatic main.clj 475]
  [clojure.main$init_opt invokeStatic main.clj 477]
  [clojure.main$init_opt invoke main.clj 477]
  [clojure.main$initialize invokeStatic main.clj 508]
  [clojure.main$null_opt invokeStatic main.clj 542]
  [clojure.main$null_opt invoke main.clj 539]
  [clojure.main$main invokeStatic main.clj 664]
  [clojure.main$main doInvoke main.clj 616]
  [clojure.lang.RestFn applyTo RestFn.java 137]
  [clojure.lang.Var applyTo Var.java 705]
  [clojure.main main main.java 40]]}
Error loading complete.core: Could not locate complete/core__init.class, complete/core.clj or complete/core.cljc on classpath.
blueberry commented 3 years ago

I really don't know, as I don't use Idea. Obviously, some detail in its (default) configuration should pick up the OS environment, but it doesn't. I can confirm that for many users, it does work in Idea, so it's a matter of investigating your particular configuration.

A quick workaround is to start repl from terminal, and then connect Idea to it.

erkkikeranen commented 3 years ago

thanks. It works by connecting over network. if someone knows gotchas for running local repl in IDE, would be glad to know.