Closed PatriceFRey closed 2 years ago
julesghub
commented
3 years ago The warnings above were only made in 2.10.5 UWGeo release. The warnings occur when you call init_model() in the UWGeo script without arguments temperature and pressure.
Can you replace the init_model() line with this line:
Model.init_model(temperature="steady-state", pressure="lithostatic")
does that change things?
PS: have you run the model with 2.10.5 on your local machine?
PatriceFRey
commented
3 years ago Thanks of the help Julian.
Yes, with Model.init_model(temperature="steady-state", pressure="lithostatic”) the warning is gone.
Now I bumped into another issue …
MPI_ABORT was invoked on rank 7 in communicator MPI COMMUNICATOR 3 DUP FROM 0 with errorcode 1.
NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. You may or may not see output from other processes, depending on exactly when Open MPI kills them.
It looks like a few things has changed in 2.10.5 to the point that input script that worked ok on previous version needs to be modified somehow.
PS: have you run the model with 2.10.5 on your local machine?
No.
Tomorrow is a full day for me, and then I take students in the field on Friday. I’ll return next Tuesday. So I won’t be able to run anything until next week.
Cheers
Patrice
Patrice Rey @.**@.> Dr Patrice Rey School of Geosciences Earthbyte Research Group ARC-ITRH Basin Genesis Hub
Associate Head Education Geosciences Elected Fellow Geological Society of America Editorial board of EGU - Solid Earth Editorial board of Frontiers in Earth Science - Structural Geology and Tectonics
Tel: 02 9351 2067 http://www.geosci.usyd.edu.au/users/prey/ @.***
On 24 Mar 2021, at 1:48 pm, Julian Giordani @.**@.>> wrote:
The warnings above were only made in 2.10.5 UWGeo release. The warnings occur when you call init_model() in the UWGeo script without arguments temperature and pressure. Can you replace the init_model() line with this line: Model.init_model(temperature="steady-state", pressure="lithostatic")
does that change things?
PS: have you run the model with 2.10.5 on your local machine?
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jdpmoore
commented
2 years ago Previously UWGeo used to automatically solve for the steady state temperature. This should be added to the documentation on readthedocs as a breaking change from previous versions of UWGeodynamics as it took me a while to figure it out. I came here today to flag it as an issue then found it was already an open issue.
Hello Romain or Julian
In my pbs I have replaced "source /scratch/q97/Underworld/UWGeodynamics_2.10.sh" by "source /scratch/q97/codes/install_on_gadi.sh" in order to access the new version UWGeo 2.10.5.
On well tested 2D model I've got this warnings on Gadi:
/scratch/q97/codes/UWGeodynamics_2.10.5/lib/python3.8/site-packages/UWGeodynamics/_model.py:1524: UserWarning: You have not passed anything to the temperature argument. The temperature field will not be initialised warnings.warn("You have not passed anything to the temperature argument. The temperature field will not be initialised") /scratch/q97/codes/UWGeodynamics_2.10.5/lib/python3.8/site-packages/UWGeodynamics/_model.py:1528: UserWarning: You have not passed anything to the pressure argument. The pressure field will not be initialised warnings.warn("You have not passed anything to the pressure argument. The pressure field will not be initialised")
… and UWGeo stops.
Any insights? Cheers Patrice