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uni-halle / gerbil

A fast and memory-efficient k-mer counter with GPU-support
MIT License
34 stars 14 forks source link

don't compile using many cuda, gcc and intel version #8

Open redayounsi opened 6 years ago

redayounsi commented 6 years ago

Hi,

I used many versions of cuda [5 to 8] and many versions of intel [14 to 18] and many gcc versions [4 to 7]. Can you provide all the versions you've used to test the program including the versions of dependencies. and which one has worked for you?

Thanks

srechner commented 6 years ago

We tested the software with gcc in versions 4 and 5, and cuda in versions 7 to 9 on an Ubuntu 16.04 LTS system. Our actual configuration uses gcc 5.4 and cuda 9.1. Which error does the compiler report?

redayounsi commented 6 years ago

Each combination of compilers give different set of system errors. What boost version do you currently use with the above compilers you mentioned?

srechner commented 6 years ago

At my system, CMake outputs the following information about the libraries.

CXX compiler: 5.4.0. Boost version: 1.62.0 BZip2 version: 1.0.6 ZLIB version: 1.2.8 CUDA version: 9.1.

If possible, can you report the error your compiler gave for this (or another) configuration?