unipept / unipept-database

Makes database tables and indices for Unipept
MIT License
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Directly keep track of taxa associated with peptides #28

Closed pverscha closed 4 months ago

pverscha commented 1 year ago

This PR improves the Unipept database by also directly keeping track of which list of taxa is associated with a peptide. This information is currently already available in the database, but can only be extracted by performing a slow series of table join operations, which drastically slow the Unipept API down.