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unipept / unipept-database

Makes database tables and indices for Unipept
MIT License
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Download NCBI Taxdmp file in CI #41

Closed stijndcl closed 7 months ago

stijndcl commented 8 months ago

We discussed adding this file to the automatic releases because it is sometimes arbitrarily slow to download

stijndcl commented 7 months ago

Will do. I didn't do it yet in this PR because the very first time the file will not exist, but using the default as a fallback is a good idea and fixes that problem as well.

stijndcl commented 7 months ago

Very ironically showing that this is already a good change, NCBI just changed their endpoint and the original download URL no longer works. I've updated the script.