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urgi-anagen / TE_finder

A suite of C++ programs developed for transposable element search and their annotation in large eukaryotic genome sequence. A part of the REPET package.
https://urgi.versailles.inra.fr/Tools/REPET
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18 stars 3 forks source link

compilation failed #6

Open EmilieSmeets22 opened 6 months ago

EmilieSmeets22 commented 6 months ago

Hi,

I was able to run cmake but not to install the package:

[doutree@plop] TE_finder $ cmake .
-- Found CppUnit: /tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so
-- Configuring done (0.6s)
-- Generating done (2.2s)
-- Build files have been written to: /home/doutree/workspace/git/TE_finder
[doutree@plop] TE_finder $ make install
[  0%] Building CXX object src/SDGlib/CMakeFiles/SDGlib.dir/BioSeq.cpp.o
[  1%] Building CXX object src/SDGlib/CMakeFiles/SDGlib.dir/BioSeqDB.cpp.o
[  1%] Building CXX object src/SDGlib/CMakeFiles/SDGlib.dir/FastaIstream.cpp.o
[  2%] Building CXX object src/SDGlib/CMakeFiles/SDGlib.dir/FastaOstream.cpp.o
[  2%] Building CXX object src/SDGlib/CMakeFiles/SDGlib.dir/SDGBioSeq.cpp.o
[  3%] Building CXX object src/SDGlib/CMakeFiles/SDGlib.dir/SDGBioSeqDB.cpp.o
[  3%] Building CXX object src/SDGlib/CMakeFiles/SDGlib.dir/SDGBitStr.cpp.o
[  4%] Building CXX object src/SDGlib/CMakeFiles/SDGlib.dir/SDGError.cpp.o
[  5%] Building CXX object src/SDGlib/CMakeFiles/SDGlib.dir/SDGFastaBioSeq.cpp.o
[  5%] Building CXX object src/SDGlib/CMakeFiles/SDGlib.dir/SDGFastaIstream.cpp.o
[  6%] Building CXX object src/SDGlib/CMakeFiles/SDGlib.dir/SDGFastaOstream.cpp.o
[  6%] Building CXX object src/SDGlib/CMakeFiles/SDGlib.dir/SDGMemBioSeq.cpp.o
[  7%] Building CXX object src/SDGlib/CMakeFiles/SDGlib.dir/SDGString.cpp.o
[  7%] Building CXX object src/SDGlib/CMakeFiles/SDGlib.dir/SDGSubBioSeq.cpp.o
[  8%] Linking CXX static library libSDGlib.a
[  8%] Built target SDGlib
[  9%] Building CXX object src/SDGlib/testfiles/CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o
[ 10%] Building CXX object src/SDGlib/testfiles/CMakeFiles/test_SDG.dir/test_u.cpp.o
[ 10%] Linking CXX executable test_SDG
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `Test_SDGlib::test_BioSeq()':
Test_SDGlib.cpp:(.text+0x10f): undefined reference to `CppUnit::SourceLine::SourceLine(std::string const&, int)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `Test_SDGlib::test_BioSeq_subseq()':
Test_SDGlib.cpp:(.text+0xa05): undefined reference to `CppUnit::SourceLine::SourceLine(std::string const&, int)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `Test_SDGlib::test_BioSeq_complement()':
Test_SDGlib.cpp:(.text+0x13c4): undefined reference to `CppUnit::SourceLine::SourceLine(std::string const&, int)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `Test_SDGlib::test_BioSeq_reverse()':
Test_SDGlib.cpp:(.text+0x1b33): undefined reference to `CppUnit::SourceLine::SourceLine(std::string const&, int)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `Test_SDGlib::test_FastaIstream()':
Test_SDGlib.cpp:(.text+0x2c4c): undefined reference to `CppUnit::SourceLine::SourceLine(std::string const&, int)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o:Test_SDGlib.cpp:(.text+0x2d59): more undefined references to `CppUnit::SourceLine::SourceLine(std::string const&, int)' follow
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `void CppUnit::assertEquals<std::string>(std::string const&, std::string const&, CppUnit::SourceLine, std::string const&)':
Test_SDGlib.cpp:(.text._ZN7CppUnit12assertEqualsISsEEvRKT_S3_NS_10SourceLineERKSs[_ZN7CppUnit12assertEqualsISsEEvRKT_S3_NS_10SourceLineERKSs]+0x46): undefined reference to `CppUnit::AdditionalMessage::AdditionalMessage(std::string const&)'
Test_SDGlib.cpp:(.text._ZN7CppUnit12assertEqualsISsEEvRKT_S3_NS_10SourceLineERKSs[_ZN7CppUnit12assertEqualsISsEEvRKT_S3_NS_10SourceLineERKSs]+0x7c): undefined reference to `CppUnit::Asserter::failNotEqual(std::string, std::string, CppUnit::SourceLine const&, CppUnit::AdditionalMessage const&, std::string)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `void CppUnit::assertEquals<BioSeq>(BioSeq const&, BioSeq const&, CppUnit::SourceLine, std::string const&)':
Test_SDGlib.cpp:(.text._ZN7CppUnit12assertEqualsI6BioSeqEEvRKT_S4_NS_10SourceLineERKSs[_ZN7CppUnit12assertEqualsI6BioSeqEEvRKT_S4_NS_10SourceLineERKSs]+0x46): undefined reference to `CppUnit::AdditionalMessage::AdditionalMessage(std::string const&)'
Test_SDGlib.cpp:(.text._ZN7CppUnit12assertEqualsI6BioSeqEEvRKT_S4_NS_10SourceLineERKSs[_ZN7CppUnit12assertEqualsI6BioSeqEEvRKT_S4_NS_10SourceLineERKSs]+0x7c): undefined reference to `CppUnit::Asserter::failNotEqual(std::string, std::string, CppUnit::SourceLine const&, CppUnit::AdditionalMessage const&, std::string)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `Test_SDGlib::addTestsToSuite(CppUnit::TestSuiteBuilderContextBase&)':
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x11f): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x144): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x1f2): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x217): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x2c6): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x2eb): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x39a): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x3bf): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x477): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x49f): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x55d): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x585): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x643): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x66b): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x729): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x751): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x80f): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x837): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x8f5): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x91d): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x9db): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0xa03): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0xac1): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0xae9): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0xba7): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0xbcf): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0xc88): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0xcab): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `CppUnit::TestSuiteFactory<Test_SDGlib>::makeTest()':
Test_SDGlib.cpp:(.text._ZN7CppUnit16TestSuiteFactoryI11Test_SDGlibE8makeTestEv[_ZN7CppUnit16TestSuiteFactoryI11Test_SDGlibE8makeTestEv]+0x1e): undefined reference to `CppUnit::TestNamer::getFixtureName() const'
Test_SDGlib.cpp:(.text._ZN7CppUnit16TestSuiteFactoryI11Test_SDGlibE8makeTestEv[_ZN7CppUnit16TestSuiteFactoryI11Test_SDGlibE8makeTestEv]+0x38): undefined reference to `CppUnit::TestSuite::TestSuite(std::string)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `_GLOBAL__sub_I__ZN11Test_SDGlib11test_BioSeqEv':
Test_SDGlib.cpp:(.text.startup+0x3d): undefined reference to `CppUnit::TestFactoryRegistry::getRegistry(std::string const&)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o:(.rodata._ZTVN7CppUnit10TestCallerI11Test_SDGlibEE[_ZTVN7CppUnit10TestCallerI11Test_SDGlibEE]+0x40): undefined reference to `CppUnit::TestCase::getName() const'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o:(.rodata._ZTVN7CppUnit10TestCallerI11Test_SDGlibEE[_ZTVN7CppUnit10TestCallerI11Test_SDGlibEE]+0x48): undefined reference to `CppUnit::Test::findTestPath(std::string const&, CppUnit::TestPath&) const'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o:(.rodata._ZTVN7CppUnit10TestCallerI11Test_SDGlibEE[_ZTVN7CppUnit10TestCallerI11Test_SDGlibEE]+0x58): undefined reference to `CppUnit::Test::findTest(std::string const&) const'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o:(.rodata._ZTVN7CppUnit10TestCallerI11Test_SDGlibEE[_ZTVN7CppUnit10TestCallerI11Test_SDGlibEE]+0x60): undefined reference to `CppUnit::Test::resolveTestPath(std::string const&) const'
CMakeFiles/test_SDG.dir/test_u.cpp.o: In function `main':
test_u.cpp:(.text.startup+0xa7): undefined reference to `CppUnit::TestFactoryRegistry::getRegistry(std::string const&)'
test_u.cpp:(.text.startup+0xfa): undefined reference to `CppUnit::TestRunner::run(CppUnit::TestResult&, std::string const&)'
test_u.cpp:(.text.startup+0x13b): undefined reference to `CppUnit::CompilerOutputter::CompilerOutputter(CppUnit::TestResultCollector*, std::ostream&, std::string const&)'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::basic_string(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_create(unsigned long&, unsigned long)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::invalid_argument::invalid_argument(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_append(char const*, unsigned long)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_dispose()@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::append(char const*, unsigned long)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::out_of_range::out_of_range(char const*)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `vtable for std::__cxx11::basic_stringbuf<char, std::char_traits<char>, std::allocator<char> >@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `vtable for std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_mutate(unsigned long, unsigned long, char const*, unsigned long)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::reserve(unsigned long)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__throw_out_of_range_fmt(char const*, ...)@GLIBCXX_3.4.20'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::rfind(char, unsigned long) const@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::invalid_argument::invalid_argument(char const*)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::runtime_error::runtime_error(char const*)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::append(char const*)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::find(char, unsigned long) const@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >::~basic_ostringstream()@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `VTT for std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::basic_string(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `operator delete(void*, unsigned long)@CXXABI_1.3.9'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__throw_bad_array_new_length()@GLIBCXX_3.4.29'
collect2: error: ld returned 1 exit status
make[2]: *** [src/SDGlib/testfiles/CMakeFiles/test_SDG.dir/build.make:115: src/SDGlib/testfiles/test_SDG] Error 1
make[1]: *** [CMakeFiles/Makefile2:427: src/SDGlib/testfiles/CMakeFiles/test_SDG.dir/all] Error 2
make: *** [Makefile:136: all] Error 2
[doutree@by0q4n] TE_finder $ make install
[  8%] Built target SDGlib
[  8%] Linking CXX executable test_SDG
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `Test_SDGlib::test_BioSeq()':
Test_SDGlib.cpp:(.text+0x10f): undefined reference to `CppUnit::SourceLine::SourceLine(std::string const&, int)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `Test_SDGlib::test_BioSeq_subseq()':
Test_SDGlib.cpp:(.text+0xa05): undefined reference to `CppUnit::SourceLine::SourceLine(std::string const&, int)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `Test_SDGlib::test_BioSeq_complement()':
Test_SDGlib.cpp:(.text+0x13c4): undefined reference to `CppUnit::SourceLine::SourceLine(std::string const&, int)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `Test_SDGlib::test_BioSeq_reverse()':
Test_SDGlib.cpp:(.text+0x1b33): undefined reference to `CppUnit::SourceLine::SourceLine(std::string const&, int)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `Test_SDGlib::test_FastaIstream()':
Test_SDGlib.cpp:(.text+0x2c4c): undefined reference to `CppUnit::SourceLine::SourceLine(std::string const&, int)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o:Test_SDGlib.cpp:(.text+0x2d59): more undefined references to `CppUnit::SourceLine::SourceLine(std::string const&, int)' follow
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `void CppUnit::assertEquals<std::string>(std::string const&, std::string const&, CppUnit::SourceLine, std::string const&)':
Test_SDGlib.cpp:(.text._ZN7CppUnit12assertEqualsISsEEvRKT_S3_NS_10SourceLineERKSs[_ZN7CppUnit12assertEqualsISsEEvRKT_S3_NS_10SourceLineERKSs]+0x46): undefined reference to `CppUnit::AdditionalMessage::AdditionalMessage(std::string const&)'
Test_SDGlib.cpp:(.text._ZN7CppUnit12assertEqualsISsEEvRKT_S3_NS_10SourceLineERKSs[_ZN7CppUnit12assertEqualsISsEEvRKT_S3_NS_10SourceLineERKSs]+0x7c): undefined reference to `CppUnit::Asserter::failNotEqual(std::string, std::string, CppUnit::SourceLine const&, CppUnit::AdditionalMessage const&, std::string)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `void CppUnit::assertEquals<BioSeq>(BioSeq const&, BioSeq const&, CppUnit::SourceLine, std::string const&)':
Test_SDGlib.cpp:(.text._ZN7CppUnit12assertEqualsI6BioSeqEEvRKT_S4_NS_10SourceLineERKSs[_ZN7CppUnit12assertEqualsI6BioSeqEEvRKT_S4_NS_10SourceLineERKSs]+0x46): undefined reference to `CppUnit::AdditionalMessage::AdditionalMessage(std::string const&)'
Test_SDGlib.cpp:(.text._ZN7CppUnit12assertEqualsI6BioSeqEEvRKT_S4_NS_10SourceLineERKSs[_ZN7CppUnit12assertEqualsI6BioSeqEEvRKT_S4_NS_10SourceLineERKSs]+0x7c): undefined reference to `CppUnit::Asserter::failNotEqual(std::string, std::string, CppUnit::SourceLine const&, CppUnit::AdditionalMessage const&, std::string)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `Test_SDGlib::addTestsToSuite(CppUnit::TestSuiteBuilderContextBase&)':
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x11f): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x144): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x1f2): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x217): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x2c6): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x2eb): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x39a): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x3bf): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x477): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x49f): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x55d): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x585): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x643): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x66b): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x729): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x751): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x80f): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x837): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x8f5): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x91d): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0x9db): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0xa03): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0xac1): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0xae9): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0xba7): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0xbcf): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0xc88): undefined reference to `CppUnit::TestSuiteBuilderContextBase::getTestNameFor(std::string const&) const'
Test_SDGlib.cpp:(.text._ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE[_ZN11Test_SDGlib15addTestsToSuiteERN7CppUnit27TestSuiteBuilderContextBaseE]+0xcab): undefined reference to `CppUnit::TestCase::TestCase(std::string const&)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `CppUnit::TestSuiteFactory<Test_SDGlib>::makeTest()':
Test_SDGlib.cpp:(.text._ZN7CppUnit16TestSuiteFactoryI11Test_SDGlibE8makeTestEv[_ZN7CppUnit16TestSuiteFactoryI11Test_SDGlibE8makeTestEv]+0x1e): undefined reference to `CppUnit::TestNamer::getFixtureName() const'
Test_SDGlib.cpp:(.text._ZN7CppUnit16TestSuiteFactoryI11Test_SDGlibE8makeTestEv[_ZN7CppUnit16TestSuiteFactoryI11Test_SDGlibE8makeTestEv]+0x38): undefined reference to `CppUnit::TestSuite::TestSuite(std::string)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o: In function `_GLOBAL__sub_I__ZN11Test_SDGlib11test_BioSeqEv':
Test_SDGlib.cpp:(.text.startup+0x3d): undefined reference to `CppUnit::TestFactoryRegistry::getRegistry(std::string const&)'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o:(.rodata._ZTVN7CppUnit10TestCallerI11Test_SDGlibEE[_ZTVN7CppUnit10TestCallerI11Test_SDGlibEE]+0x40): undefined reference to `CppUnit::TestCase::getName() const'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o:(.rodata._ZTVN7CppUnit10TestCallerI11Test_SDGlibEE[_ZTVN7CppUnit10TestCallerI11Test_SDGlibEE]+0x48): undefined reference to `CppUnit::Test::findTestPath(std::string const&, CppUnit::TestPath&) const'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o:(.rodata._ZTVN7CppUnit10TestCallerI11Test_SDGlibEE[_ZTVN7CppUnit10TestCallerI11Test_SDGlibEE]+0x58): undefined reference to `CppUnit::Test::findTest(std::string const&) const'
CMakeFiles/test_SDG.dir/Test_SDGlib.cpp.o:(.rodata._ZTVN7CppUnit10TestCallerI11Test_SDGlibEE[_ZTVN7CppUnit10TestCallerI11Test_SDGlibEE]+0x60): undefined reference to `CppUnit::Test::resolveTestPath(std::string const&) const'
CMakeFiles/test_SDG.dir/test_u.cpp.o: In function `main':
test_u.cpp:(.text.startup+0xa7): undefined reference to `CppUnit::TestFactoryRegistry::getRegistry(std::string const&)'
test_u.cpp:(.text.startup+0xfa): undefined reference to `CppUnit::TestRunner::run(CppUnit::TestResult&, std::string const&)'
test_u.cpp:(.text.startup+0x13b): undefined reference to `CppUnit::CompilerOutputter::CompilerOutputter(CppUnit::TestResultCollector*, std::ostream&, std::string const&)'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::basic_string(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_create(unsigned long&, unsigned long)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::invalid_argument::invalid_argument(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_append(char const*, unsigned long)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_dispose()@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::append(char const*, unsigned long)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::out_of_range::out_of_range(char const*)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `vtable for std::__cxx11::basic_stringbuf<char, std::char_traits<char>, std::allocator<char> >@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `vtable for std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_mutate(unsigned long, unsigned long, char const*, unsigned long)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::reserve(unsigned long)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__throw_out_of_range_fmt(char const*, ...)@GLIBCXX_3.4.20'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::rfind(char, unsigned long) const@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::invalid_argument::invalid_argument(char const*)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::runtime_error::runtime_error(char const*)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::append(char const*)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::find(char, unsigned long) const@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >::~basic_ostringstream()@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `VTT for std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::basic_string(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)@GLIBCXX_3.4.21'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `operator delete(void*, unsigned long)@CXXABI_1.3.9'
/tools/eb/software/CppUnit/1.15.1-GCCcore-12.2.0/lib/libcppunit.so: undefined reference to `std::__throw_bad_array_new_length()@GLIBCXX_3.4.29'
collect2: error: ld returned 1 exit status
make[2]: *** [src/SDGlib/testfiles/CMakeFiles/test_SDG.dir/build.make:115: src/SDGlib/testfiles/test_SDG] Error 1
make[1]: *** [CMakeFiles/Makefile2:427: src/SDGlib/testfiles/CMakeFiles/test_SDG.dir/all] Error 2
make: *** [Makefile:136: all] Error 2

Thank you already