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False positive：java.io.FileNotFoundException: /tools/Trimmomatic-0.39/adapters.fa (No such file or directory) #65

Open Warelock opened 3 months ago

Warelock commented 3 months ago

There is only the adapters folder in the file, but no adapters.fa file：

java.io.FileNotFoundException: /tools/Trimmomatic-0.39/adapters.fa (No such file or directory) at java.base/java.io.FileInputStream.open0(Native Method) at java.base/java.io.FileInputStream.open(FileInputStream.java:219) at java.base/java.io.FileInputStream.(FileInputStream.java:157) at org.usadellab.trimmomatic.fasta.FastaParser.parse(FastaParser.java:54) at org.usadellab.trimmomatic.trim.IlluminaClippingTrimmer.loadSequences(IlluminaClippingTrimmer.java:110) at org.usadellab.trimmomatic.trim.IlluminaClippingTrimmer.makeIlluminaClippingTrimmer(IlluminaClippingTrimmer.java:71) at org.usadellab.trimmomatic.trim.TrimmerFactory.makeTrimmer(TrimmerFactory.java:32) at org.usadellab.trimmomatic.Trimmomatic.createTrimmers(Trimmomatic.java:59) at org.usadellab.trimmomatic.TrimmomaticPE.run(TrimmomaticPE.java:552) at org.usadellab.trimmomatic.Trimmomatic.main(Trimmomatic.java:80)