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usegalaxy-au / infrastructure

Galaxy Australia's Ansible scripts
MIT License
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make singularity volumes overridable context variables #2210

Closed cat-bro closed 1 month ago

cat-bro commented 1 month ago

Rearrange slurm_singularity_volumes etc to be context variables on the default tool instead of hard coding them on destinations. This makes it possible for an aws gateway user to have '/mnt/aws_gateway:ro' appended to volume strings for their jobs.

@jlqfab @nuwang from a dry run this appears to just work.

cat-bro commented 1 month ago

If this is approved, please don't merge it. I'm confident that it works but would still like to keep an eye on galaxy when it goes in.